Miyakogusa Predicted Gene
- Lj6g3v1618410.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1618410.3 Non Chatacterized Hit- tr|I1MAZ9|I1MAZ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56230
PE,88.29,0,seg,NULL; Adap_comp_sub,Clathrin adaptor, mu subunit,
C-terminal; Second domain of Mu2 adaptin subun,CUFF.59689.3
(1446 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60667 similar to UniRef100_A7NT73 Cluster: Chromosome... 2561 0.0
gnl|LJGI|TC67481 similar to UniRef100_A7NT73 Cluster: Chromosome... 862 0.0
gnl|LJGI|TC61512 homologue to UniRef100_A7NT73 Cluster: Chromoso... 218 7e-56
gnl|LJGI|TC63113 similar to UniRef100_A7NT73 Cluster: Chromosome... 70 4e-11
>gnl|LJGI|TC60667 similar to UniRef100_A7NT73 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1633
Score = 2561 bits (1292), Expect = 0.0
Identities = 1295/1296 (99%)
Strand = Plus / Plus
Query: 1 atgatctcgcagttcttcgtcctctctcagcgtggcgataacatcgtcttccgagactac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atgatctcgcagttcttcgtcctctctcagcgtggcgataacatcgtcttccgagactac 128
Query: 61 cgtggtgaggttccgaagggaagtgcagagatatttttccgcaaagtgaagttttgggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 cgtggtgaggttccgaagggaagtgcagagatatttttccgcaaagtgaagttttgggaa 188
Query: 121 gatgggggactggaggaggcaccacctgtctttaatgtagatggtgtaaattactttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gatgggggactggaggaggcaccacctgtctttaatgtagatggtgtaaattactttcat 248
Query: 181 gtgaaagttgttggcttattgtttgttgcaactacaagggttaacatatcaccgtccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gtgaaagttgttggcttattgtttgttgcaactacaagggttaacatatcaccgtccttt 308
Query: 241 gtttttgagcttttacaaagaattgctcgtgttgttaaagattaccttgggattctcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtttttgagcttttacaaagaattgctcgtgttgttaaagattaccttgggattctcaat 368
Query: 301 gaagactcaatacgaaaaaactttgtgcttgtgtatgagttacttgatgaagttatggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gaagactcaatacgaaaaaactttgtgcttgtgtatgagttacttgatgaagttatggat 428
Query: 361 tttggttatgtgcaaacaacatctactgaattgttgaagtcctatgttttcaatgagcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tttggttatgtgcaaacaacatctactgaattgttgaagtcctatgttttcaatgagcca 488
Query: 421 attgtgattgacgccgcacgcctgtcacctcttggacctgctgcaatgttttcacaaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 attgtgattgacgccgcacgcctgtcacctcttggacctgctgcaatgttttcacaaggg 548
Query: 481 acaaaaagaatgccaggaatagctgttacaaaatctgttgttgcaacagagcccgggggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 acaaaaagaatgccaggaatagctgttacaaaatctgttgttgcaacagagcccgggggt 608
Query: 541 agaaggagggaggaaatcttcgtagatataattgagaaaatcagcctcacttttagctct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agaaggagggaggaaatcttcgtagatataattgagaaaatcagcctcacttttagctct 668
Query: 601 agtggatatatactgacttccgagattgatggcaccatacaaatgaagagctatcttact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 agtggatatatactgacttccgagattgatggcaccatacaaatgaagagctatcttact 728
Query: 661 ggaaatcctgaaattcgattagctcttaatgaagacctttccattggaacaagccaggga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 ggaaatcctgaaattcgattagctcttaatgaagacctttccattggaacaagccaggga 788
Query: 721 accagttatggttataggagttcatctggctcaggaccggtgctattagatgactgtaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 accagttatggttataggagttcatctggctcaggaccggtgctattagatgactgtaat 848
Query: 781 tttcatgaatctgttcgccttgacagcttcgatacggacagaaccctatccctggtacca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 tttcatgaatctgttcgccttgacagcttcgatacggacagaaccctatccctggtacca 908
Query: 841 ccagatggtgaatttccagtcatgaactaccgtattacccaggaatttaggcctcctttt 900
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 cccgatggtgaatttccagtcatgaactaccgtattacccaggaatttaggcctcctttt 968
Query: 901 cgtattaatgctttaatcgaagaagcagggtcccttaaggcagaagtaattcttaaagta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 cgtattaatgctttaatcgaagaagcagggtcccttaaggcagaagtaattcttaaagta 1028
Query: 961 aatgcacagtttgcctcaagtataacagcaaacactgtcaaagtgcagatgccactccca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 aatgcacagtttgcctcaagtataacagcaaacactgtcaaagtgcagatgccactccca 1088
Query: 1021 aaatgtaccaccagagttagttttgaactagaacctggagctgttggacaaacaactgac 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 aaatgtaccaccagagttagttttgaactagaacctggagctgttggacaaacaactgac 1148
Query: 1081 tttaaggaggcaaataagaggctagaatggagtttaaagaagattactggaggctcggag 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 tttaaggaggcaaataagaggctagaatggagtttaaagaagattactggaggctcggag 1208
Query: 1141 catactttacgtgcaaagctaaccttttctcaggaaatacacggtaatataacgaaagaa 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 catactttacgtgcaaagctaaccttttctcaggaaatacacggtaatataacgaaagaa 1268
Query: 1201 tctggacctgttagcatgacatttactataccaatgtataatacgtcacaacttcaggta 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 tctggacctgttagcatgacatttactataccaatgtataatacgtcacaacttcaggta 1328
Query: 1261 aaatatttgcagatatcaaagaaatctggaacgcac 1296
||||||||||||||||||||||||||||||||||||
Sbjct: 1329 aaatatttgcagatatcaaagaaatctggaacgcac 1364
Score = 260 bits (131), Expect = 2e-68
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 1316 gcgctctttgttattgcttttgttgtatttactttattctttatttgtatattacattca 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 gcgctctttgttattgcttttgttgtatttactttattctttatttgtatattacattca 1523
Query: 1376 agttcagtatagacgacgttagttgtttgctttcctctccattacacacatacaccaagc 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 agttcagtatagacgacgttagttgtttgctttcctctccattacacacatacaccaagc 1583
Query: 1436 tggatttatag 1446
|||||||||||
Sbjct: 1584 tggatttatag 1594
>gnl|LJGI|TC67481 similar to UniRef100_A7NT73 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 743
Score = 862 bits (435), Expect = 0.0
Identities = 435/435 (100%)
Strand = Plus / Plus
Query: 862 atgaactaccgtattacccaggaatttaggcctccttttcgtattaatgctttaatcgaa 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaactaccgtattacccaggaatttaggcctccttttcgtattaatgctttaatcgaa 60
Query: 922 gaagcagggtcccttaaggcagaagtaattcttaaagtaaatgcacagtttgcctcaagt 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagcagggtcccttaaggcagaagtaattcttaaagtaaatgcacagtttgcctcaagt 120
Query: 982 ataacagcaaacactgtcaaagtgcagatgccactcccaaaatgtaccaccagagttagt 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataacagcaaacactgtcaaagtgcagatgccactcccaaaatgtaccaccagagttagt 180
Query: 1042 tttgaactagaacctggagctgttggacaaacaactgactttaaggaggcaaataagagg 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttgaactagaacctggagctgttggacaaacaactgactttaaggaggcaaataagagg 240
Query: 1102 ctagaatggagtttaaagaagattactggaggctcggagcatactttacgtgcaaagcta 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctagaatggagtttaaagaagattactggaggctcggagcatactttacgtgcaaagcta 300
Query: 1162 accttttctcaggaaatacacggtaatataacgaaagaatctggacctgttagcatgaca 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 accttttctcaggaaatacacggtaatataacgaaagaatctggacctgttagcatgaca 360
Query: 1222 tttactataccaatgtataatacgtcacaacttcaggtaaaatatttgcagatatcaaag 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttactataccaatgtataatacgtcacaacttcaggtaaaatatttgcagatatcaaag 420
Query: 1282 aaatctggaacgcac 1296
|||||||||||||||
Sbjct: 421 aaatctggaacgcac 435
Score = 260 bits (131), Expect = 2e-68
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 1316 gcgctctttgttattgcttttgttgtatttactttattctttatttgtatattacattca 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gcgctctttgttattgcttttgttgtatttactttattctttatttgtatattacattca 594
Query: 1376 agttcagtatagacgacgttagttgtttgctttcctctccattacacacatacaccaagc 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agttcagtatagacgacgttagttgtttgctttcctctccattacacacatacaccaagc 654
Query: 1436 tggatttatag 1446
|||||||||||
Sbjct: 655 tggatttatag 665
>gnl|LJGI|TC61512 homologue to UniRef100_A7NT73 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 898
Score = 218 bits (110), Expect = 7e-56
Identities = 527/664 (79%), Gaps = 4/664 (0%)
Strand = Plus / Plus
Query: 1 atgatctcgcagttcttcgtcctctctcagcgtggcgataacatcgtcttccgagactac 60
||||| || ||||||||||| || |||||| | ||||| |||||||||||||| |||||
Sbjct: 141 atgatttctcagttcttcgtgctttctcagagaggcgacaacatcgtcttccgcgactat 200
Query: 61 cgtggtgaggttccgaagggaagtgcagagatatttttccgcaaagtgaagttttgggaa 120
|| ||||| || | || |||||||| |||| ||| ||||| ||||| ||||| ||| ||
Sbjct: 201 cgcggtgaagtgcaaaaaggaagtgctgagacattcttccgaaaagtcaagttctggaaa 260
Query: 121 gatgggggactggaggag--gcaccacctgtctttaatgtagatggtgtaaattactttc 178
|| | | ||| ||||| || || ||||| ||||||||||||||||| || ||||| |
Sbjct: 261 gaggatg--ctgaaggagatgctcctcctgtttttaatgtagatggtgtgaactacttcc 318
Query: 179 atgtgaaagttgttggcttattgtttgttgcaactacaagggttaacatatcaccgtcct 238
||||||| | || ||| || || |||||||| || || || || || | || || ||
Sbjct: 319 atgtgaaggctgctgggttgttatttgttgctacaactagagtcaatgtctccccttctc 378
Query: 239 ttgtttttgagcttttacaaagaattgctcgtgttgttaaagattaccttgggattctca 298
||||||| | |||||| ||| |||| || |||||| | || ||||||||||| |||| |
Sbjct: 379 ttgttttggggcttttgcaacgaatcgcgcgtgttatcaaggattaccttggtgttctta 438
Query: 299 atgaagactcaatacgaaaaaactttgtgcttgtgtatgagttacttgatgaagttatgg 358
|||| || || | | || |||||||||||||||||||| || || |||||| | || |
Sbjct: 439 atgaggattcttttaggaagaactttgtgcttgtgtatgaattgctggatgaaatgatcg 498
Query: 359 attttggttatgtgcaaacaacatctactgaattgttgaagtcctatgttttcaatgagc 418
|||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||
Sbjct: 499 attttggttatgtgcaaacaacatctactgaacttttgaagtcatatgttttcaatgagc 558
Query: 419 caattgtgattgacgccgcacgcctgtcacctcttggacctgctgcaatgttttcacaag 478
||||| ||||||| || || || || | || | || |||||| | || ||| ||||
Sbjct: 559 caattatgattgatgctgcgcggcttcctcccatgggtcctgcttccatttttatgcaag 618
Query: 479 ggacaaaaagaatgccaggaatagctgttacaaaatctgttgttgcaacagagcccgggg 538
|||| ||| |||||||||| | |||| |||||||||||||| |||| | || | || |
Sbjct: 619 ggaccaaacgaatgccaggtacagctattacaaaatctgtttttgctaatgaatctggtg 678
Query: 539 gtagaaggagggaggaaatcttcgtagatataattgagaaaatcagcctcacttttagct 598
||| | |||||| || ||||| || ||| ||||||||||||| || | || || | ||
Sbjct: 679 gtaagaagagggaagagatctttgttgatgtaattgagaaaataagtgttacattcaact 738
Query: 599 ctagtggatatatactgacttccgagattgatggcaccatacaaatgaagagctatctta 658
||||||||| |||||| ||| ||||| ||||||||||| ||||||||||| |||||||
Sbjct: 739 ctagtggatttatacttactagtgagatagatggcaccattcaaatgaagagttatctta 798
Query: 659 ctgg 662
||||
Sbjct: 799 ctgg 802
>gnl|LJGI|TC63113 similar to UniRef100_A7NT73 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 710
Score = 69.9 bits (35), Expect = 4e-11
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 833 tggtaccaccagatggtgaatttccagtcatgaactaccgtattacccaggaatttaggc 892
|||||||||||||||| |||||||| |||||||| || ||||| || || ||||| ||
Sbjct: 55 tggtaccaccagatggggaatttcctgtcatgaattatcgtatgactcaaccatttaagc 114
Query: 893 ctccttttcgtattaatgctttaatcgaagaagcagggtcccttaaggcagaagt 947
| || |||||||||||||| || || |||||| |||| |||| ||||| |||||
Sbjct: 115 caccctttcgtattaatgcattgattgaagaaacaggacccctcaaggctgaagt 169
Score = 54.0 bits (27), Expect = 3e-06
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 1036 gttagttttgaactagaacctggagctgttggacaaacaactgactttaaggaggcaaat 1095
|||| |||||| ||||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 258 gttaattttgagttagaacctggagcagttggtcacacaactgattttaaggaaacaaat 317
Query: 1096 aagaggctagaatgg 1110
|| || || ||||||
Sbjct: 318 aaaagactggaatgg 332