Miyakogusa Predicted Gene
- Lj6g3v1618380.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1618380.1 tr|G7KBJ7|G7KBJ7_MEDTR Ubiquitin
carboxyl-terminal hydrolase OS=Medicago truncatula GN=MTR_5g066000
,71.55,0,seg,NULL; Cysteine proteinases,NULL; UCH_2_3,Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2;,CUFF.59686.1
(2115 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO023296 similar to UniRef100_A7NUN3 Cluster: Chromosom... 1156 0.0
gnl|LJGI|TC80887 similar to UniRef100_A7NUN3 Cluster: Chromosome... 866 0.0
gnl|LJGI|TC79523 weakly similar to UniRef100_Q754G3 Cluster: AFR... 640 0.0
gnl|LJGI|TC59888 similar to UniRef100_A7NUN3 Cluster: Chromosome... 82 2e-14
gnl|LJGI|BP066462 similar to UniRef100_UPI00006A0C4B Cluster: Me... 76 1e-12
gnl|LJGI|FS346581 54 4e-06
>gnl|LJGI|GO023296 similar to UniRef100_A7NUN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 607
Score = 1156 bits (583), Expect = 0.0
Identities = 603/607 (99%), Gaps = 2/607 (0%)
Strand = Plus / Plus
Query: 812 aatctcccctttcacctaaggacatactctctcaactacagaaaaatggaagtcaacttg 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aatctcccctttcacctaaggacatactctctcaactacagaaaaatggaagtcaacttg 61
Query: 872 gtaatggaagagaagaagatgcacatgaatttctaagacatgtgatcgagacgatgcaat 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gtaatggaagagaagaagatgcacatgaatttctaagacatgtgatcgagacgatgcaat 121
Query: 932 ctgtttgccttatggaatctggacctaacatgccagactcattaaaagaggaaacaaatt 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctgtttgccttatggaatctggacctaacatgccagactcattaaaagaggaaacaaatt 181
Query: 992 taacgggtctaacatttggaggctaccttcgttcaaagataaaatgcatgaaatgcggag 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 taacgggtctaacatttggaggctaccttcgttcaaagataaaatgcatgaaatgcggag 241
Query: 1052 ggaaatctgagcgtcaagaaaggatgttggatctgactgttgagatagaaggggagatag 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggaaatctgagcgtcaagaaaggatgttggatctgactgttgagatagaaggggagatag 301
Query: 1112 cgaccttggaggaggcccttcgacagtttacaagcatcgagactctagatggagaaaaca 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgaccttggaggaggcccttcgacagtttacaagcatcgagactctagatggagaaaaca 361
Query: 1172 agtaccactgtgtcagatgtaaatcttatcagaaggccaagaagaaaatgacagtttcag 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agtaccactgtgtcagatgtaaatcttatcagaaggccaagaagaaaatgacagtttcag 421
Query: 1232 aggcacctaatgttcttacaattacattaaaaagatttaagtctggaaaatttgggaagc 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aggcacctaatgttcttacaattacattaaaaagatttaagtctggaaaatttgggaagc 481
Query: 1292 tcaataagtctattcggtttcctgaaatacttgacttggcacctttcatgagcgggacta 1351
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 482 tcaataagt-tattcggtttcctgaaatacttgacttggcacctttcatgggcgggacta 540
Query: 1352 gtgatttggctatatacaggctgtat-ggggtggttgttcacttggataccatgaatgct 1410
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 541 gtgatttggctatatacaggctgtatgggggtggttgttcacttgggtaccatgaatgct 600
Query: 1411 gcctttt 1417
|||||||
Sbjct: 601 gcctttt 607
>gnl|LJGI|TC80887 similar to UniRef100_A7NUN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 1853
Score = 866 bits (437), Expect = 0.0
Identities = 937/1103 (84%), Gaps = 3/1103 (0%)
Strand = Plus / Plus
Query: 547 attgctggaaaatacagtgacaagggtctttttccgtataatttgtttgtcaagctttat 606
|||||||||| ||||| |||||||||| |||||| ||| | || |||||||||||||||
Sbjct: 13 attgctggaagatacaatgacaagggtacttttccatatgaattatttgtcaagctttat 72
Query: 607 aactggaatagagtggagtttcaaccatttggtcttataaattgtggaaacagctgttat 666
|||| ||| | ||||||| | ||||||||||||||||||||||||||||| ||||||
Sbjct: 73 aacttgaacaaggtggagtcgcgcccatttggtcttataaattgtggaaacagttgttat 132
Query: 667 gctaatgctgtactccagtgtttggcatttacaccacccctgactgcttatctgcttcaa 726
||||||||||| || ||||| || |||||||||||||| |||||||||||| ||||||||
Sbjct: 133 gctaatgctgttcttcagtgcttagcatttacaccacctctgactgcttatttgcttcaa 192
Query: 727 agacttcattctaaatcatgtacaaatagaaaatggtgtttcgtctgtgatcttgaaagt 786
|||| ||||||||||||||| |||||| |||| |||||||| |||||| |||||||
Sbjct: 193 ggactgcattctaaatcatgtgcaaataaaaaaaggtgtttcacctgtgaatttgaaagc 252
Query: 787 ttgattttgaaggcaaaagacacaaaatctcccctttcacctaaggacatactctctcaa 846
|||||||||||| |||| ||||| ||||||||||| || |||| | |||||||||||||
Sbjct: 253 ttgattttgaagtcaaaggacacgaaatctcccctgtctcctattggcatactctctcaa 312
Query: 847 ctacagaaaaatggaagtcaacttggtaatggaagagaagaagatgcacatgaatttcta 906
|||||| | ||| ||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 313 ttacagagcattgggagtcagcttggcaatggcagagaagaagatgcacatgaatttctg 372
Query: 907 agacatgtgatcgagacgatgcaatctgtttgccttatggaatctggacctaacatgcca 966
|| |||| || || || |||||||| | ||||||| ||||| |||| ||| ||
Sbjct: 373 aggcatgctattgatacaatgcaatcggcttgccttgtggaagctgggattaaagcatca 432
Query: 967 gactcattaaaagaggaaacaaatttaacgggtctaacatttggaggctaccttcgttca 1026
| ||||| |||| || |||| ||||| ||||||||||||||||||||||||| | |||
Sbjct: 433 ggttcattggaagaagacacaactttaatgggtctaacatttggaggctaccttagatca 492
Query: 1027 aagataaaatgcatgaaatgcggagggaaatctgagcgtcaagaaaggatgttggatctg 1086
|||||||||||||||||||| || ||||| ||||||||||| ||||||||| ||||||||
Sbjct: 493 aagataaaatgcatgaaatgtggcgggaagtctgagcgtcacgaaaggatgatggatctg 552
Query: 1087 actgttgagatagaaggggagatagcgaccttggaggaggcccttcgacagtttacaagc 1146
||||||||||| |||||||||||| | ||| | | |||||||||||| | ||||||||||
Sbjct: 553 actgttgagattgaaggggagataaccaccctagtggaggcccttcggcggtttacaagc 612
Query: 1147 atcgagactctagatggagaaaacaagtaccactgtgtcagatgtaaatcttatcagaag 1206
| |||| || | ||||||||||||||||||||||||| ||| |||||||||||| |||||
Sbjct: 613 accgaggctttggatggagaaaacaagtaccactgtgacaggtgtaaatcttatgagaag 672
Query: 1207 gccaagaagaaaatgacagtttcagaggcacctaatgttcttacaattacattaaaaaga 1266
||||||||||| ||||| |||| |||||||| ||||||||||||||| ||||||| |||
Sbjct: 673 gccaagaagaagctgacaatttcggaggcacccaatgttcttacaattgcattaaagaga 732
Query: 1267 tttaagtctggaaaatttgggaagctcaataagtctattcggtttcctgaaatacttgac 1326
||| |||| ||||||||||| || ||||| ||| |||||| ||||||||||||||||||
Sbjct: 733 tttcagtccggaaaatttggcaaactcaacaagcctattcaatttcctgaaatacttgac 792
Query: 1327 ttggcacctttcatgagcgggactagtgat---ttggctatatacaggctgtatggggtg 1383
||||||||||| |||| |||||||||||| | | |||||||| ||||||||||
Sbjct: 793 ttggcaccttttgtgagtgggactagtgataaatcacccatatacagattgtatggggta 852
Query: 1384 gttgttcacttggataccatgaatgctgccttttcaggtcactatgtgtgctatgtaaag 1443
|||||||||||||||| ||||||||||| || || |||||||||||||||||||| |||
Sbjct: 853 gttgttcacttggatattatgaatgctgctttctctggtcactatgtgtgctatgttaag 912
Query: 1444 aatttccaaaacaggtggttcaaggttgatgatagtgtggtgacagctgttgaattggaa 1503
||| | ||||||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 913 aatattcaaaacaagtggttcaaggttgatgacagtgtggtgacagctgttgaatctgag 972
Query: 1504 actgtcttgacaaaaggagcatacatgcttttgtatgcaaggtgctcacccagggcccca 1563
| || || || |||||||| || |||||||| |||||||||||||| || ||||| |||
Sbjct: 973 agagtgttaacgaaaggagcttatatgcttttttatgcaaggtgctcgccaagggctcca 1032
Query: 1564 agattgatccggaacatgatagtatcctctgacccgaaaagcaaagcccatgcaaaaact 1623
||||| ||| |||||| |||| ||||| | || |||||||||||| | ||| ||| |||
Sbjct: 1033 agattaatcaggaacaggatactatccccagattcgaaaagcaaagtcaatggaaagact 1092
Query: 1624 gttgcaatgaaggcaagaaatgt 1646
|||||| ||| |||||| ||||
Sbjct: 1093 cttgcaacgaaagcaagacatgt 1115
>gnl|LJGI|TC79523 weakly similar to UniRef100_Q754G3 Cluster: AFR107Wp; n=1;
Eremothecium gossypii|Rep: AFR107Wp - Ashbya gossypii
(Yeast) (Eremothecium gossypii), partial (5%)
Length = 454
Score = 640 bits (323), Expect = 0.0
Identities = 374/391 (95%)
Strand = Plus / Plus
Query: 1725 cgacatgaaaaggatttttgaagaagactcgtcgagtgataattcatccctgatgagtag 1784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgacatgaaaaggatttttgaagaagactcgtcgagtgataattcatccctgatgagtag 60
Query: 1785 caactctgatgaatggtcttgcagtactgatagcacctgtgattcaacaagcactgatga 1844
| |||||||||||||||||| | |||||||||||||||||||||| || ||| |||||||
Sbjct: 61 ccactctgatgaatggtcttcccgtactgatagcacctgtgattccaccagccctgatga 120
Query: 1845 ttatgctgattatatttttggtaattcgggacgcggcttgggtggcatcttgagaaattc 1904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttatgctgattatatttttggtaattcgggacgcggcttgggtggcatcttgagaaattc 180
Query: 1905 tgattctgaggtagatggtcttttgtacagaagcagaggcgtttctcatttgcatactga 1964
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 181 tgattctgaggtagatggtcttttgtaccgaagccgaggcgtttctcatttgcatactga 240
Query: 1965 cacaattgtagagcataggaagttagatacaagtaggagtagcagcagttttagggaaac 2024
||| |||||||||||||||||||||||||| |||||||||||| || |||||||||||||
Sbjct: 241 caccattgtagagcataggaagttagataccagtaggagtagccgccgttttagggaaac 300
Query: 2025 tggctctttacagagatcaggatccaaccattttagtgatataaattctggagtattgta 2084
||||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 301 tggctctttaccgagatccggatcccacccttttagtgatataaattctggagtattgta 360
Query: 2085 tagaaaatcaaaattaagaacggattgaaaa 2115
||||||||| |||||||||||||||||||||
Sbjct: 361 tagaaaatccaaattaagaacggattgaaaa 391
>gnl|LJGI|TC59888 similar to UniRef100_A7NUN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 832
Score = 81.8 bits (41), Expect = 2e-14
Identities = 125/153 (81%)
Strand = Plus / Plus
Query: 1730 tgaaaaggatttttgaagaagactcgtcgagtgataattcatccctgatgagtagcaact 1789
||||| ||||||| |||||||||| || ||||||| ||||||||| | || ||||| |
Sbjct: 174 tgaaagggattttacaagaagactcatcaagtgatagttcatcccttttcagcagcaatt 233
Query: 1790 ctgatgaatggtcttgcagtactgatagcacctgtgattcaacaagcactgatgattatg 1849
|||||||| | |||||||||||||| || | |||||||||| |||| |||||| |
Sbjct: 234 ctgatgaaggatcttgcagtactgaaagtaggcgtgattcaaccagcattgatgacttct 293
Query: 1850 ctgattatatttttggtaattcgggacgcggct 1882
|||| |||||||||||| |||| ||||| ||||
Sbjct: 294 ctgactatatttttggtgattcaggacgtggct 326
>gnl|LJGI|BP066462 similar to UniRef100_UPI00006A0C4B Cluster: Membrane-associated
guanylate kinase WW and PDZ domain-containing protein 1,
partial (1%)
Length = 471
Score = 75.8 bits (38), Expect = 1e-12
Identities = 68/74 (91%), Gaps = 3/74 (4%)
Strand = Plus / Minus
Query: 1751 actcgtcgagtgataattcatccctgatgagtagcaactc-tgatgaatggtc-ttgcag 1808
|||||||||||||||||||||||||||||| |||| |||| |||||||||||| || |||
Sbjct: 471 actcgtcgagtgataattcatccctgatgattagcgactcgtgatgaatggtcgttccag 412
Query: 1809 tac-tgatagcacc 1821
||| ||||||||||
Sbjct: 411 tacgtgatagcacc 398
>gnl|LJGI|FS346581
Length = 813
Score = 54.0 bits (27), Expect = 4e-06
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 431 ttgctagctgttctccaaattctaagaatggcttgaagatatctgtgcagaaagttggtg 490
|||||| ||||||| |||||||||||| |||||||| || ||||| |||||| | ||
Sbjct: 71 ttgctaactgttctgcaaattctaagagcggcttgaaaatgtctgtattgaaagtagttg 12
Query: 491 atcagtttagg 501
|||||||||||
Sbjct: 11 atcagtttagg 1