Miyakogusa Predicted Gene

Lj6g3v1618210.2
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1618210.2 Non Chatacterized Hit- tr|B4FJA0|B4FJA0_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,29.52,1e-16,coiled-coil,NULL; seg,NULL,CUFF.59681.2
         (1104 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW595367                                                     821   0.0  
gnl|LJGI|GO036758                                                     170   1e-41

>gnl|LJGI|BW595367 
          Length = 488

 Score =  821 bits (414), Expect = 0.0
 Identities = 414/414 (100%)
 Strand = Plus / Plus

                                                                        
Query: 691  ataagggcactagtttccagcatggagcaactgcagtctgaaaatattgaaaaggatagt 750
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5    ataagggcactagtttccagcatggagcaactgcagtctgaaaatattgaaaaggatagt 64

                                                                        
Query: 751  gcaatatcacagctagaaagcaaagtggcggatatggaggctgaaacaaaaagattaaac 810
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65   gcaatatcacagctagaaagcaaagtggcggatatggaggctgaaacaaaaagattaaac 124

                                                                        
Query: 811  aaccaaatatcaggactctcagaggagttgggatctttaagaaagtgcaggaacaaccaa 870
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125  aaccaaatatcaggactctcagaggagttgggatctttaagaaagtgcaggaacaaccaa 184

                                                                        
Query: 871  gtcgcacctgttttaaagcgttgcacagaaggaactaaaacatctgactcgggaaccatt 930
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185  gtcgcacctgttttaaagcgttgcacagaaggaactaaaacatctgactcgggaaccatt 244

                                                                        
Query: 931  aagagcagcaggagaaaaaatgtcaccttcaaccttaaaaaagaaatatgtactcctgat 990
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245  aagagcagcaggagaaaaaatgtcaccttcaaccttaaaaaagaaatatgtactcctgat 304

                                                                        
Query: 991  gccgacagtcctgccaaattatcggagaaggacaagaaaagcctgaagaggaaaggaggc 1050
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305  gccgacagtcctgccaaattatcggagaaggacaagaaaagcctgaagaggaaaggaggc 364

                                                                  
Query: 1051 tcagtccccgcctctgaaactcccaagctgttctcttccagcttcaaggttcca 1104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365  tcagtccccgcctctgaaactcccaagctgttctcttccagcttcaaggttcca 418


>gnl|LJGI|GO036758 
          Length = 504

 Score =  170 bits (86), Expect = 1e-41
 Identities = 86/86 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1019 aggacaagaaaagcctgaagaggaaaggaggctcagtccccgcctctgaaactcccaagc 1078
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292  aggacaagaaaagcctgaagaggaaaggaggctcagtccccgcctctgaaactcccaagc 351

                                      
Query: 1079 tgttctcttccagcttcaaggttcca 1104
            ||||||||||||||||||||||||||
Sbjct: 352  tgttctcttccagcttcaaggttcca 377