Miyakogusa Predicted Gene

Lj6g3v1603990.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1603990.1 Non Chatacterized Hit- tr|F6H333|F6H333_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.43,0.00000003,Formin Homology,Actin-binding FH2/DRF
autoregulatory; Formin homology 2 domain (FH2
domain),Actin-bi,CUFF.59653.1
         (1296 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78701 similar to UniRef100_A9U104 Cluster: Predicted ...   167   2e-40
gnl|LJGI|BP042153 similar to UniRef100_A7QQ26 Cluster: Chromosom...   113   3e-24

>gnl|LJGI|TC78701 similar to UniRef100_A9U104 Cluster: Predicted protein; n=1;
            Physcomitrella patens subsp. patens|Rep: Predicted
            protein - Physcomitrella patens subsp. patens, partial
            (5%)
          Length = 655

 Score =  167 bits (84), Expect = 2e-40
 Identities = 87/88 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1209 acaaggagatgctgaaaaggagaatttacatgctgaaagagggaatttaagagtccatga 1268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    acaaggagatgctgaaaaggagaatttacatgctgaaagagggaatttaagagtccatga 60

                                        
Query: 1269 aggacaagatattatgtgtgtccaataa 1296
            ||||||||||||||||||||||| ||||
Sbjct: 61   aggacaagatattatgtgtgtcccataa 88


>gnl|LJGI|BP042153 similar to UniRef100_A7QQ26 Cluster: Chromosome chr2 scaffold_140,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_140, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (4%)
          Length = 491

 Score =  113 bits (57), Expect = 3e-24
 Identities = 72/77 (93%)
 Strand = Plus / Minus

                                                                        
Query: 1147 gtgacacaaatacttgttacctttgtcaagatgttcaagaagacaagggaggagaacaaa 1206
            ||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| ||
Sbjct: 491  gtgacacaaatacttgttgtctttgtcaagatgttcaagaagtcaagggaggagaacgaa 432

                             
Query: 1207 aaacaaggagatgctga 1223
            ||||||| |||||||||
Sbjct: 431  aaacaagcagatgctga 415