Miyakogusa Predicted Gene
- Lj6g3v1574610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1574610.1 Non Chatacterized Hit- tr|D7T657|D7T657_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,83.03,0,HCO3_cotransp,Bicarbonate transporter, C-terminal;
seg,NULL; no description,NULL; ANION EXCHANGE PRO,CUFF.59627.1
(2136 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC594801 homologue to UniRef100_A7NVV7 Cluster: Chromos... 525 e-148
gnl|LJGI|TC78113 weakly similar to UniRef100_A7Q0T8 Cluster: Chr... 420 e-116
gnl|LJGI|TC73894 similar to UniRef100_A8MS82 Cluster: Uncharacte... 172 6e-42
gnl|LJGI|TC61896 similar to UniRef100_A7PCZ0 Cluster: Chromosome... 66 1e-09
>gnl|LJGI|DC594801 homologue to UniRef100_A7NVV7 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 503
Score = 525 bits (265), Expect = e-148
Identities = 268/269 (99%)
Strand = Plus / Plus
Query: 1581 agttctggaggagtgccatgcaacttacgtggaaactatacctttcaagacaatagcagt 1640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 agttctggaggagtgccatgcaacttacgtggaaactatacctttcaagacaatagcagt 80
Query: 1641 atttacagtcttccaaactgcttacttgcttgtttgttttggtatcacgtgggttccaat 1700
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 81 atttacagtcttccaaactgcttacttgcttgtttgttttggtatcacgtgggtgccaat 140
Query: 1701 agctggggttctattcccattgatgatcatgcttctggttcctgtaagacaatacatttt 1760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 agctggggttctattcccattgatgatcatgcttctggttcctgtaagacaatacatttt 200
Query: 1761 gcccaagttcttcaaaggggcacaccttcaggatttagatgctgcagaatatgaagaagt 1820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcccaagttcttcaaaggggcacaccttcaggatttagatgctgcagaatatgaagaagt 260
Query: 1821 acctgctttaccatttgaactagctactg 1849
|||||||||||||||||||||||||||||
Sbjct: 261 acctgctttaccatttgaactagctactg 289
>gnl|LJGI|TC78113 weakly similar to UniRef100_A7Q0T8 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 578
Score = 420 bits (212), Expect = e-116
Identities = 232/239 (97%)
Strand = Plus / Plus
Query: 1898 tagatggaatgattactcgaagccggggtgagtttagacgtgtttgcagtctgaaggtgg 1957
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 tagatggaatgattactcgaagccggggtgagtttagacgtgttggcagtctgaaggtgg 60
Query: 1958 tgagctcccctggaactccatccaaagagttgacaggtattcaaagtccaaggttctcag 2017
|||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 61 tgagctccnctggaactccatcccaagagttgacaggtattcaaagtcccaggttctcag 120
Query: 2018 ataaagtatacagccctagggtaaaccaactcagagaaaatcatagccctcgaggtgttg 2077
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 ataaagtatacagccctagggtaaacccactcagagaaaatcatagccctcgaggtgttg 180
Query: 2078 ggagaggaccatttagccctggagaagctaagccatcgaatttgagaaagagtggataa 2136
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 ggagaggaccctttagccctggagaagctaagccctcgaatttgagaaagagtggataa 239
>gnl|LJGI|TC73894 similar to UniRef100_A8MS82 Cluster: Uncharacterized protein
At2g47160.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At2g47160.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (32%)
Length = 1127
Score = 172 bits (87), Expect = 6e-42
Identities = 393/495 (79%)
Strand = Plus / Plus
Query: 1342 tttgatattgagaaggaaatcgacgacttgttgcctgtcgaggttaaagaacagcgagtg 1401
|||||| ||||||| |||||||||||| || | || || ||||| || || ||||| |||
Sbjct: 60 tttgatgttgagaaagaaatcgacgacctgctaccggttgaggtgaaggagcagcgtgtg 119
Query: 1402 agcaacttgctccaatctttgatggtaggaggatgtgttgcagcaatgcctttgctaaaa 1461
|| |||||||| ||||| ||||||| ||||| ||||||||||| ||||| | || ||
Sbjct: 120 agtaacttgcttcaatcagtgatggttggagggtgtgttgcagccatgccaatcctcaag 179
Query: 1462 aggattccaacttctgtactgtggggctattttgctttcatggccatcgaaaacttaccc 1521
|||||||| ||||| ||||| |||||||| ||||| ||||||||||| |||| || ||
Sbjct: 180 aggattcctacttcagtactttggggctactttgcattcatggccattgaaagtttgcca 239
Query: 1522 ggcaaccagttctgggagcggattttactagttttcactgctccaagtagacgatacaaa 1581
|| || ||||| ||||| |||| | || | |||||||| ||||| ||| |||||||
Sbjct: 240 ggaaatcagttttgggaaaggatcctgttactcttcactgcaccaagcagaagatacaag 299
Query: 1582 gttctggaggagtgccatgcaacttacgtggaaactatacctttcaagacaatagcagta 1641
|| || ||||| | ||||| |||| |||||||| | ||||||||||||||||||| |
Sbjct: 300 gtgcttgaggattatcatgctacttttgtggaaacagtccctttcaagacaatagcagca 359
Query: 1642 tttacagtcttccaaactgcttacttgcttgtttgttttggtatcacgtgggttccaata 1701
|| || | |||||||| | ||| | || | |||||||| | || |||||||| ||
Sbjct: 360 ttcaccattttccaaaccgtttatcttctaggatgttttggactaacttgggttcctatc 419
Query: 1702 gctggggttctattcccattgatgatcatgcttctggttcctgtaagacaatacattttg 1761
|| ||||| | ||||| ||| |||||||||| | ||||| |||||||| ||| | |
Sbjct: 420 gcgggggtcatgttccctttgttgatcatgctcttagttccagtaagacagtacttcctc 479
Query: 1762 cccaagttcttcaaaggggcacaccttcaggatttagatgctgcagaatatgaagaagta 1821
|||||||| ||||||||||||||||||||||| || ||||| ||||| |||||||| |
Sbjct: 480 cccaagtttttcaaaggggcacaccttcaggacttggatgcagcagagtatgaagagcaa 539
Query: 1822 cctgctttaccattt 1836
||||||||||||||
Sbjct: 540 actgctttaccattt 554
>gnl|LJGI|TC61896 similar to UniRef100_A7PCZ0 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 813
Score = 65.9 bits (33), Expect = 1e-09
Identities = 132/165 (80%)
Strand = Plus / Plus
Query: 1662 ttacttgcttgtttgttttggtatcacgtgggttccaatagctggggttctattcccatt 1721
|||||||||| |||| ||||| | |||||| | ||||| |||||||| || ||||||||
Sbjct: 155 ttacttgcttctttgctttggcttaacgtggataccaattgctggggtccttttcccatt 214
Query: 1722 gatgatcatgcttctggttcctgtaagacaatacattttgcccaagttcttcaaaggggc 1781
| | ||||||||||| || || || | ||||| || | |||||||| |||||||| ||
Sbjct: 215 gttaatcatgcttctcgtcccggtccggcaatattttcttcccaagtttttcaaaggagc 274
Query: 1782 acaccttcaggatttagatgctgcagaatatgaagaagtacctgc 1826
|| ||||| || || ||||| |||| |||||| |||| ||||||
Sbjct: 275 ccatcttcaagagttggatgcagcagcatatgaggaagcacctgc 319