Miyakogusa Predicted Gene

Lj6g3v1559350.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1559350.1 tr|K2LZK3|K2LZK3_BIFBI ATP-dependent helicase
(Fragment) OS=Bifidobacterium bifidum IPLA 20015 PE=4 ,26.23,2.9,
,CUFF.59612.1
         (712 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61167 weakly similar to UniRef100_A9TIH8 Cluster: Pre...  1396   0.0  

>gnl|LJGI|TC61167 weakly similar to UniRef100_A9TIH8 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (6%)
          Length = 938

 Score = 1396 bits (704), Expect = 0.0
 Identities = 710/712 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagggcctaagagtgtcataaggctcaagcccggtgctcctccattggaaatcagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27  atggcagggcctaagagtgtcataaggctcaagcccggtgctcctccattggaaatcagc 86

                                                                       
Query: 61  aacatacaaaaagccacaaacagcaaaactggactgttctctgaaagaagaatcatcact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  aacatacaaaaagccacaaacagcaaaactggactgttctctgaaagaagaatcatcact 146

                                                                       
Query: 121 tacacattgggtaagaggctcttcaccttggtcataaccaagttaggttgcgaggatcgt 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 147 tacacattgggtaagaggctcttcaccttggtcatagccaagttaggttgcgaggatcgt 206

                                                                       
Query: 181 gttaacatcgtatacctcgaactcaccgagctcaacggtaaggcttcctctgccaatctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gttaacatcgtatacctcgaactcaccgagctcaacggtaaggcttcctctgccaatctc 266

                                                                       
Query: 241 aacctgcggctcatgaaaaacgacaaatacggtgttctgtgcaccacaagcagcaaactc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aacctgcggctcatgaaaaacgacaaatacggtgttctgtgcaccacaagcagcaaactc 326

                                                                       
Query: 301 ataggctcctatgattcttttaaggagaactactccgtaccgcctctgcccgagacggaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ataggctcctatgattcttttaaggagaactactccgtaccgcctctgcccgagacggaa 386

                                                                       
Query: 361 ctcacctgctacgtttgtcgggagacaggttccggagggtgtttcacagtggagaagagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ctcacctgctacgtttgtcgggagacaggttccggagggtgtttcacagtggagaagagg 446

                                                                       
Query: 421 aaggtgaacagtgaagttgtggagagtgtgaaggccacacacgcgtttgtgattgatgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaggtgaacagtgaagttgtggagagtgtgaaggccacacacgcgtttgtgattgatgat 506

                                                                       
Query: 481 gagttgagtttcaatgtgaagattaaaataagaagcgtgagagagggtttgagtgttgag 540
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gagttgagtttcgatgtgaagattaaaataagaagcgtgagagagggtttgagtgttgag 566

                                                                       
Query: 541 gtgggggaaccggtgaaggtgacgatggattatacgaaacaagcggttgcgaggataagg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gtgggggaaccggtgaaggtgacgatggattatacgaaacaagcggttgcgaggataagg 626

                                                                       
Query: 601 gggaagatggaaagtgagatggatggtagcacgctctcccagttcagaaactccatccct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gggaagatggaaagtgagatggatggtagcacgctctcccagttcagaaactccatccct 686

                                                               
Query: 661 aaacttcagagttatggggatagtgctgataagcgctatgattctgagtgag 712
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aaacttcagagttatggggatagtgctgataagcgctatgattctgagtgag 738