Miyakogusa Predicted Gene

Lj6g3v1559320.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1559320.1 gene.g66357.t1.1
         (486 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO024800 similar to UniRef100_Q2HU23 Cluster: Mitochond...   408   e-113

>gnl|LJGI|GO024800 similar to UniRef100_Q2HU23 Cluster: Mitochondrial import inner
           membrane translocase, subunit Tim17/22; n=1; Medicago
           truncatula|Rep: Mitochondrial import inner membrane
           translocase, subunit Tim17/22 - Medicago truncatula
           (Barrel medic), partial (83%)
          Length = 670

 Score =  408 bits (206), Expect = e-113
 Identities = 256/278 (92%), Gaps = 21/278 (7%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaacctgaagacgagcagtgaggtggagactcgagctctccttgataaggtttctagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  atgaacctgaagacgagcagtgaggtggagactcgagctctccttgataaggtttctagc 139

                                                                       
Query: 61  ttcgacaaaaatgaagggctcttcaaccttggccaccctcttctcaaccgcatcgctgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ttcgacaaaaatgaagggctcttcaaccttggccaccctcttctcaaccgcatcgctgag 199

                                                                       
Query: 121 tgcttcgtcaaagctgctggaataggagcggttcaagctgtgtcacgcg----------- 169
           |||||||||||||||||||||||||||||||||||||||||||||||||           
Sbjct: 200 tgcttcgtcaaagctgctggaataggagcggttcaagctgtgtcacgcgaaggttattcc 259

                                                                       
Query: 170 ----------aaggtaccaggggtgttgatagcaacaatggcagtataccaccggaactt 219
                     |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 260 attactattcaaggtaccaggggtgttgatagtaacaatggcagtataccaccggaactt 319

                                                 
Query: 220 tcaggtgccaagaaaaatcatttgcctggtcttagagg 257
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcaggtgccaagaaaaatcatttgcctggtcttagagg 357



 Score =  341 bits (172), Expect = 2e-93
 Identities = 213/231 (92%), Gaps = 18/231 (7%)
 Strand = Plus / Plus

                                                                       
Query: 256 ggggtggctgcaggaatatattcaggtctaacatatgggctgaaggaagctcgtggtgct 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggggtggctgcaggaatatattcaggtctaacatatgggctgaaggaagctcgtggtgct 481

                                                                       
Query: 316 catgattgggtagtacttcttttctggaaaaacagtgcagttgctggagcaatcactggg 375
           |||||||||                  |||||||||||||||||||||||||||||||||
Sbjct: 482 catgattgg------------------aaaaacagtgcagttgctggagcaatcactggg 523

                                                                       
Query: 376 gcatcccttgcccttacattggaagatgtcagtcatgatcagattgtgcaatgtgctatc 435
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gcatcccttgcccttacattggaagatgtcagtcatgatcagattgtgcaatgtgctatc 583

                                                              
Query: 436 actggagctgcaatctccactgctgcaaatcttctcactgggattttctaa 486
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 actggagctgcaatctccactgctgcaaatcttctcactgggattttctaa 634