Miyakogusa Predicted Gene

Lj6g3v1538090.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1538090.1 Non Chatacterized Hit- tr|B8LMP5|B8LMP5_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,39.84,6e-19,seg,NULL,CUFF.59589.1
         (666 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BI419225 weakly similar to UniRef100_Q2NNS2 Cluster: 16...   248   4e-65

>gnl|LJGI|BI419225 weakly similar to UniRef100_Q2NNS2 Cluster: 1629capsid; n=1;
           Hyphantria cunea nucleopolyhedrovirus|Rep: 1629capsid -
           Hyphantria cunea nuclear polyhedrosis virus (HcNPV),
           partial (5%)
          Length = 191

 Score =  248 bits (125), Expect = 4e-65
 Identities = 125/125 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcattccaagttagtgtcagacgttggatcttagcctttgcactccttcacgtttgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggcattccaagttagtgtcagacgttggatcttagcctttgcactccttcacgtttgc 60

                                                                       
Query: 61  ctattctggaaaaactttggaaatggtgatgattatatgcccgagactcaggaaggcact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctattctggaaaaactttggaaatggtgatgattatatgcccgagactcaggaaggcact 120

                
Query: 121 ggatt 125
           |||||
Sbjct: 121 ggatt 125