Miyakogusa Predicted Gene

Lj6g3v1525980.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1525980.1 Non Chatacterized Hit- tr|F6HQT4|F6HQT4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,29.41,0.00000000000009,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; ZF_SWIM,Zinc finger, SWIM-type; SWIM,Zinc finger,
S,CUFF.59586.1
         (807 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69831 weakly similar to UniRef100_A7Q0J4 Cluster: Chr...  1013   0.0  

>gnl|LJGI|TC69831 weakly similar to UniRef100_A7Q0J4 Cluster: Chromosome chr7
           scaffold_42, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (33%)
          Length = 696

 Score = 1013 bits (511), Expect = 0.0
 Identities = 511/511 (100%)
 Strand = Plus / Plus

                                                                       
Query: 297 taactgttttcacatcccggatcagtatttgccttcgcgttggcgaagcaccggtttgtc 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   taactgttttcacatcccggatcagtatttgccttcgcgttggcgaagcaccggtttgtc 60

                                                                       
Query: 357 gcctactaacccctttcggggtacaaatagcagggatcagcctgataagatacaattttt 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcctactaacccctttcggggtacaaatagcagggatcagcctgataagatacaattttt 120

                                                                       
Query: 417 ggagtccatggtttcaacacttctaatggaatccattgagaccgaagagcgcctcgacgt 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggagtccatggtttcaacacttctaatggaatccattgagaccgaagagcgcctcgacgt 180

                                                                       
Query: 477 ggcttgtgagcaggttccgatggtgctatcacagatcaaaacccttcccaggtcagcgca 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcttgtgagcaggttccgatggtgctatcacagatcaaaacccttcccaggtcagcgca 240

                                                                       
Query: 537 tgcggtgaatgatatcacatactgttatccatcagattcattgatcctgcctgaggttga 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcggtgaatgatatcacatactgttatccatcagattcattgatcctgcctgaggttga 300

                                                                       
Query: 597 agacactgatgaaatgattcatggttttgcaattgaaaatccacatgattctatggcttt 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agacactgatgaaatgattcatggttttgcaattgaaaatccacatgattctatggcttt 360

                                                                       
Query: 657 agggaagctaaaggagagaagggcaagagatggagttgatctcagtaggaagcgtaggca 716
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agggaagctaaaggagagaagggcaagagatggagttgatctcagtaggaagcgtaggca 420

                                                                       
Query: 717 gttctcagcaccattgtacggacatgatgcatctgattgctctataatggctagtgataa 776
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttctcagcaccattgtacggacatgatgcatctgattgctctataatggctagtgataa 480

                                          
Query: 777 tataagtgaagatgcattagggtatatgtag 807
           |||||||||||||||||||||||||||||||
Sbjct: 481 tataagtgaagatgcattagggtatatgtag 511