Miyakogusa Predicted Gene

Lj6g3v1480340.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1480340.1 tr|B9HKI3|B9HKI3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_820184 PE=4
SV=1,37.12,3e-18,FAMILY NOT NAMED,NULL; no description,TRAF-type;
meprin and TRAF homology,MATH; MATH,MATH; TRAF doma,gene.g66282.t1.1
         (897 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS360167 similar to UniRef100_Q6BKC6 Cluster: Similarit...   131   8e-30
gnl|LJGI|TC79250 similar to UniRef100_Q94FN3 Cluster: Phosphatid...    54   2e-06

>gnl|LJGI|FS360167 similar to UniRef100_Q6BKC6 Cluster: Similarities with
           CA4497|IPF4064 Candida albicans IPF4064; n=1;
           Debaryomyces hansenii|Rep: Similarities with
           CA4497|IPF4064 Candida albicans IPF4064 - Debaryomyces
           hansenii (Yeast) (Torulaspora hansenii), partial (3%)
          Length = 706

 Score =  131 bits (66), Expect = 8e-30
 Identities = 263/330 (79%), Gaps = 9/330 (2%)
 Strand = Plus / Minus

                                                                       
Query: 514 aagagaagtcgcaggtttacagaatgggcattcacagctttgggtcaggttctacatttt 573
           ||||| ||||| |||||||| |||||||| ||||||||||||||||  ||||||||||||
Sbjct: 492 aagagcagtcgtaggtttactgaatgggcgttcacagctttgggtcgagttctacatttt 433

                                                                       
Query: 574 cttaagagtaggaaggtgaaagatatgaatgcggatgcttgtagtcatctccaagcttta 633
           ||| | | ||  |||| | | ||||| ||||| ||| ||| |||||||||||||  | ||
Sbjct: 432 cttcatactactaaggcggatgatataaatgcagatacttctagtcatctccaaattcta 373

                                                                       
Query: 634 tgggagaaacttcag---------acatttaattttgagttgacatggctccaaccccat 684
           |||||| ||||||||         |||||||||||||| |||||||||||  | |||   
Sbjct: 372 tgggaggaacttcagtcatttaagacatttaattttgatttgacatggcttgagcccgga 313

                                                                       
Query: 685 attcgatctgccttaagtatgaaaagttatatagagaaagctcaagaactgaaaacaatg 744
            ||| ||   ||||| ||  |  ||||||||  ||||||| |    || |||||||||||
Sbjct: 312 gttctatggtccttaggttggggaagttataaggagaaagttgtgcaattgaaaacaatg 253

                                                                       
Query: 745 aaggagaatttggcaactctggagatggaaaccaaatcactgaaggagaagatatttact 804
           | | |||||||||||||||| ||||||||||| || || |||||||||||||||| ||||
Sbjct: 252 aggaagaatttggcaactctagagatggaaactaactcgctgaaggagaagatatctact 193

                                         
Query: 805 gcagaggtagatcttgaaatagcaagaaga 834
           | ||||||||||||   |||||||||||||
Sbjct: 192 gtagaggtagatctcacaatagcaagaaga 163


>gnl|LJGI|TC79250 similar to UniRef100_Q94FN3 Cluster: Phosphatidylinositol
           transfer-like protein II; n=1; Lotus japonicus|Rep:
           Phosphatidylinositol transfer-like protein II - Lotus
           japonicus, partial (4%)
          Length = 985

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 871 gctgaactagcatatggagtaccttaa 897
           |||||||||||||||||||||||||||
Sbjct: 826 gctgaactagcatatggagtaccttaa 852