Miyakogusa Predicted Gene
- Lj6g3v1464020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1464020.1 Non Chatacterized Hit- tr|I1MGM4|I1MGM4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,76.36,0,WD40,WD40 repeat; F-BOX AND WD40 DOMAIN PROTEIN,NULL; no
description,Armadillo-like helical; no desc,CUFF.59675.1
(1992 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74375 weakly similar to UniRef100_A7Q8C8 Cluster: Chr... 1808 0.0
gnl|LJGI|FS348330 similar to UniRef100_A8W3P9 Cluster: NADH dehy... 58 2e-07
>gnl|LJGI|TC74375 weakly similar to UniRef100_A7Q8C8 Cluster: Chromosome chr5
scaffold_64, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_64, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 1262
Score = 1808 bits (912), Expect = 0.0
Identities = 921/924 (99%)
Strand = Plus / Plus
Query: 1069 gtggctgatttcttgcttccaaacatatcacgtatttcttgtgttcactcacaaatcctt 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggctgatttcttgcttccaaacatatcacgtatttcttgtgttcactcacaaatcctt 60
Query: 1129 gaggtaggccacaacatcagcatagcagtctgctctctcatatattacaagggactgcta 1188
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 gaggtaggccacaacatcagcatagcagtctgctctctcatatactacaagggactgcta 120
Query: 1189 ttcagtggatattcagatggatcaatcaaggtgtgggatattagaggacactctgccagt 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcagtggatattcagatggatcaatcaaggtgtgggatattagaggacactctgccagt 180
Query: 1249 cttgtatgggacattaaagagcacaagaagtccgtgacatgtttttcagttcatgaacca 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttgtatgggacattaaagagcacaagaagtccgtgacatgtttttcagttcatgaacca 240
Query: 1309 tcagacagccttttaagcggttccactgataaaaccataaaggtgtggaaaatgatccag 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcagacagccttttaagcggttccactgataaaaccataaaggtgtggaaaatgatccag 300
Query: 1369 agaaaactggagtgtgttgaagtaatagccttgaaggaatcagtttatcatctacgtaca 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaaaactggagtgtgttgaagtaatagccttgaaggaatcagtttatcatctacgtaca 360
Query: 1429 catggtgaaacaattttcgcaattactgaaagccagggaataaagcttgttaatgaatca 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catggtgaaacaattttcgcaattactgaaagccagggaataaagcttgttaatgaatca 420
Query: 1489 agagtgatcagagatatattcaaaggcaagcgtgtaaagtgcatgacagtgactcaggga 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agagtgatcagagatatattcaaaggcaagcgtgtaaagtgcatgacagtgactcaggga 480
Query: 1549 aagttatacattggctgcacagattcaagcatacaggaatattccacaacatacaatcgg 1608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagttatacattggctgcacagattcaagcatacaggaatattccacaacatacaatcgg 540
Query: 1609 gaactagaaatcaaaccacctaccaggagttggaggaagcaaagcaagcccataaattca 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaactagaaatcaaaccacctaccaggagttggaggaagcaaagcaagcccataaattca 600
Query: 1669 atcaaagcatacagagattgcctctatagtgcaagtaggcatgttgaaggcacaacattc 1728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcaaagcatacagagattgcctctatagtgcaagtaggcatgttgaaggcacaacattc 660
Query: 1729 aaggaatggaaaagaactaggaaaccacaaatttcaatgcttactgataaaggagataat 1788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaggaatggaaaagaactaggaaaccacaaatttcaatgcttactgataaaggagataat 720
Query: 1789 gtggtgaccatggaagtggtagaagacttcttatacctaatttccagctcatcagcaaac 1848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtggtgaccatggaagtggtagaagacttcttatacctaatttccagctcatcagcaaac 780
Query: 1849 aacattcagatctggttgagaggggtaccaaagaagttggggagaatatcagcaggaagc 1908
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 781 cacattcagatctggttgagaggggtacccaagaagttggggagaatatcagcaggaagc 840
Query: 1909 aagataacatgcatgcttgctgccaatgacattattctttgtgggactgagatgggacta 1968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aagataacatgcatgcttgctgccaatgacattattctttgtgggactgagatgggacta 900
Query: 1969 atcaagggctggatccccttgtag 1992
||||||||||||||||||||||||
Sbjct: 901 atcaagggctggatccccttgtag 924
>gnl|LJGI|FS348330 similar to UniRef100_A8W3P9 Cluster: NADH dehydrogenase 2; n=1;
Drosophila willistoni|Rep: NADH dehydrogenase 2 -
Drosophila willistoni (Fruit fly), partial (17%)
Length = 714
Score = 58.0 bits (29), Expect = 2e-07
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 633 tcatcagaatatgataagaaacttcaactggttggatcaga 673
|||||||||||||||||||||||||| |||| |||||||||
Sbjct: 220 tcatcagaatatgataagaaacttcagctgg-tggatcaga 259
Score = 54.0 bits (27), Expect = 3e-06
Identities = 57/66 (86%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 856 ctcagttattcttcatctgagattatactaagtggaattcagcaatttctgcatcctggg 915
||||||||||||| |||||| |||||| ||| |||||| ||||||||||||| ||||
Sbjct: 480 ctcagttattcttaatctgacattatatg--gtgaaattcaacaatttctgcatcttggg 537
Query: 916 atggac 921
||||||
Sbjct: 538 atggac 543