Miyakogusa Predicted Gene
- Lj6g3v1464010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1464010.1 Non Chatacterized Hit- tr|D7SYE1|D7SYE1_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,83.09,0,WD40
repeat-like,WD40-repeat-containing domain; WD40,WD40 repeat; WD40
REPEAT PROTEINPRL1/PRL2-RELAT,CUFF.59674.1
(1443 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70560 similar to UniRef100_A7Q8D0 Cluster: Chromosome... 1110 0.0
gnl|LJGI|TC77741 similar to UniRef100_A7Q8D0 Cluster: Chromosome... 680 0.0
gnl|LJGI|TC70416 homologue to UniRef100_A7R7I6 Cluster: Chromoso... 454 e-127
>gnl|LJGI|TC70560 similar to UniRef100_A7Q8D0 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (82%)
Length = 648
Score = 1110 bits (560), Expect = 0.0
Identities = 560/560 (100%)
Strand = Plus / Plus
Query: 1 atggaggtggtggaacccgtagagccacaatcactgaagaagctaagcttcaagtccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atggaggtggtggaacccgtagagccacaatcactgaagaagctaagcttcaagtccctc 148
Query: 61 aagcgtgccctcgatctcttctctcctactcatggacaactcgctcctcccgatcccgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 aagcgtgccctcgatctcttctctcctactcatggacaactcgctcctcccgatcccgaa 208
Query: 121 agcaagaaaattcgcgttaattacaaggtaaatgcggagtacggtggaatcaaaggcgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agcaagaaaattcgcgttaattacaaggtaaatgcggagtacggtggaatcaaaggcgcc 268
Query: 181 actgatcagccttcccgtcaaactagttctgctacaccggatactcaacaagcagggccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 actgatcagccttcccgtcaaactagttctgctacaccggatactcaacaagcagggccg 328
Query: 241 tctaacgcgctggctctaccaggtccaggaggttcgaaggatccacagaaaggcggatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tctaacgcgctggctctaccaggtccaggaggttcgaaggatccacagaaaggcggatcc 388
Query: 301 caaaatgctttggttgttggtccatctatgccgtccacagctccgaacgatcatggtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 caaaatgctttggttgttggtccatctatgccgtccacagctccgaacgatcatggtttt 448
Query: 361 cccagcaaaagtacagccatcatttctgcctctggttcatctgaaaggaatttttcaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cccagcaaaagtacagccatcatttctgcctctggttcatctgaaaggaatttttcaaca 508
Query: 421 tctgctctaatggagagaatgccaagtaaatggccacgacctgtgtggcatgcgccatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tctgctctaatggagagaatgccaagtaaatggccacgacctgtgtggcatgcgccatgg 568
Query: 481 aagaactacagggtcatcagtggtcacttagggtgggtgagatctattgcagttgatccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aagaactacagggtcatcagtggtcacttagggtgggtgagatctattgcagttgatccc 628
Query: 541 agtaatacatggttttgtac 560
||||||||||||||||||||
Sbjct: 629 agtaatacatggttttgtac 648
>gnl|LJGI|TC77741 similar to UniRef100_A7Q8D0 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 489
Score = 680 bits (343), Expect = 0.0
Identities = 346/347 (99%)
Strand = Plus / Plus
Query: 1 atggaggtggtggaacccgtagagccacaatcactgaagaagctaagcttcaagtccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 atggaggtggtggaacccgtagagccacaatcactgaagaagctaagcttcaagtccctc 166
Query: 61 aagcgtgccctcgatctcttctctcctactcatggacaactcgctcctcccgatcccgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aagcgtgccctcgatctcttctctcctactcatggacaactcgctcctcccgatcccgaa 226
Query: 121 agcaagaaaattcgcgttaattacaaggtaaatgcggagtacggtggaatcaaaggcgcc 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agcaagaaaactcgcgttaattacaaggtaaatgcggagtacggtggaatcaaaggcgcc 286
Query: 181 actgatcagccttcccgtcaaactagttctgctacaccggatactcaacaagcagggccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 actgatcagccttcccgtcaaactagttctgctacaccggatactcaacaagcagggccg 346
Query: 241 tctaacgcgctggctctaccaggtccaggaggttcgaaggatccacagaaaggcggatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tctaacgcgctggctctaccaggtccaggaggttcgaaggatccacagaaaggcggatcc 406
Query: 301 caaaatgctttggttgttggtccatctatgccgtccacagctccgaa 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 caaaatgctttggttgttggtccatctatgccgtccacagctccgaa 453
Score = 77.8 bits (39), Expect = 2e-13
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 408 gaatttttcaacatctgctctaatggagagaatgccaag 446
|||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gaatttttcaacatctgctctaatggagagaatgccaag 489
>gnl|LJGI|TC70416 homologue to UniRef100_A7R7I6 Cluster: Chromosome undetermined
scaffold_1811, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1811,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (24%)
Length = 591
Score = 454 bits (229), Expect = e-127
Identities = 229/229 (100%)
Strand = Plus / Plus
Query: 1215 ctgggactggaaaagtggtcacaatttccagcaagcccaaacaattgtgcaacctggttc 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgggactggaaaagtggtcacaatttccagcaagcccaaacaattgtgcaacctggttc 60
Query: 1275 actggacagtgaagctggtatttatgctttaacctatgatgttacgggttcaaggcttat 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actggacagtgaagctggtatttatgctttaacctatgatgttacgggttcaaggcttat 120
Query: 1335 aagctgtgaagccgacaagaccataaaggtgtggaaagaagatgaaaatgccacgccaga 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagctgtgaagccgacaagaccataaaggtgtggaaagaagatgaaaatgccacgccaga 180
Query: 1395 gactcatccccttaacttccggcctccaaaagatatccgtcgattctag 1443
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gactcatccccttaacttccggcctccaaaagatatccgtcgattctag 229