Miyakogusa Predicted Gene

Lj6g3v1450720.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1450720.1 Non Chatacterized Hit- tr|I1MGM1|I1MGM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28767
PE,77.24,0,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL;
CONDENSIN,Condensin subunit 1/Condensin-2 complex subuni,CUFF.59508.1
         (3756 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BF177515 weakly similar to UniRef100_A7NW20 Cluster: Ch...   402   e-111
gnl|LJGI|CN825113 similar to UniRef100_A9VEI4 Cluster: Predicted...    68   4e-10

>gnl|LJGI|BF177515 weakly similar to UniRef100_A7NW20 Cluster: Chromosome chr5
            scaffold_2, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 235

 Score =  402 bits (203), Expect = e-111
 Identities = 203/203 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1239 aggtggtggaatcaatggtatgctgaggagaaggtgtgtggatgagaaagcagctgtgag 1298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235  aggtggtggaatcaatggtatgctgaggagaaggtgtgtggatgagaaagcagctgtgag 176

                                                                        
Query: 1299 gaaggctgcaattcttctggctactaacttaacttctcttctccggggtgcgattgatga 1358
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175  gaaggctgcaattcttctggctactaacttaacttctcttctccggggtgcgattgatga 116

                                                                        
Query: 1359 ggtggtgctcaaggcaatgggcatggcttgttcggatccacttgttagcatgcggaaagc 1418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115  ggtggtgctcaaggcaatgggcatggcttgttcggatccacttgttagcatgcggaaagc 56

                                   
Query: 1419 agcggttgcggctctttcagagg 1441
            |||||||||||||||||||||||
Sbjct: 55   agcggttgcggctctttcagagg 33


>gnl|LJGI|CN825113 similar to UniRef100_A9VEI4 Cluster: Predicted protein; n=1;
           Monosiga brevicollis MX1|Rep: Predicted protein -
           Monosiga brevicollis MX1, partial (10%)
          Length = 591

 Score = 67.9 bits (34), Expect = 4e-10
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 31  gagttcgaggacctccgcgacaaccaccacacaacagacccaccacctctctc 83
           |||||| |||||||||| |||||| ||||||| ||||||||||| ||||||||
Sbjct: 552 gagttcaaggacctccgngacaacaaccacaccacagacccacctcctctctc 500