Miyakogusa Predicted Gene
- Lj6g3v1444600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1444600.1 tr|G7JLH4|G7JLH4_MEDTR Xyloglucan
6-xylosyltransferase OS=Medicago truncatula GN=MTR_4g119880 PE=4
S,92.63,0,FAMILY NOT NAMED,NULL; Glyco_transf_34,Galactosyl
transferase,CUFF.59501.1
(865 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63782 homologue to UniRef100_Q5TIN3 Cluster: Alpha-1,... 408 e-113
gnl|LJGI|TC57156 homologue to UniRef100_A7PDI4 Cluster: Chromoso... 84 2e-15
>gnl|LJGI|TC63782 homologue to UniRef100_Q5TIN3 Cluster:
Alpha-1,6-xylosyltransferase; n=1; Gossypium
raimondii|Rep: Alpha-1,6-xylosyltransferase - Gossypium
raimondii (New World cotton), partial (35%)
Length = 723
Score = 408 bits (206), Expect = e-113
Identities = 371/426 (87%)
Strand = Plus / Plus
Query: 418 gtttttgaagctgatgatcaatctgctatggtttatttgttggctactgagagagggaaa 477
||||| |||||||||||||||||||||||||||||||||||||| || | ||| | | ||
Sbjct: 14 gttttcgaagctgatgatcaatctgctatggtttatttgttggccacagggagggagcaa 73
Query: 478 tggggtgataaggtttaccttgagaatggttattacttgcatggttattgggggattttg 537
||||| | ||||| |||||||||||| |||||| ||||| ||||| ||||| ||| ||
Sbjct: 74 tgggggaagaaggtgtaccttgagaatcattattatttgcacggttactggggcattctg 133
Query: 538 gtggatcgttatgaggagatgattgagaattttcaccctggttttggggatcataggtgg 597
|| ||||| ||||| |||||||||||||||| ||||||||||| || |||||| |||||
Sbjct: 134 gttgatcggtatgaagagatgattgagaattaccaccctggtttcggtgatcatcggtgg 193
Query: 598 cctttggttactcactttgtgggttgcaagccatgtggtaagtttggggattaccctgtt 657
|| |||| |||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 194 ccgctggtgactcactttgtggggtgcaagccatgtgggaagtttggggattaccctgtt 253
Query: 658 gggaggtgcttgaaacagatgggccgtgcttacaattttggggacaaccagattttgcag 717
| |||||||||||||||||||| | || ||||||||||| || |||||||| ||||||
Sbjct: 254 gagaggtgcttgaaacagatggatagagcatacaattttggtgataaccagatcttgcag 313
Query: 718 atgtatgggttcactcacaagtcacttgctagtcgcagggtgaaaagagtgaggaatgac 777
|||||||| ||||| ||||| |||||||| |||||||||||||| ||||||||||||||
Sbjct: 314 atgtatggattcacacacaaatcacttgcgagtcgcagggtgaagagagtgaggaatgag 373
Query: 778 actagtaatcctactgatgttacagatgagtttgggttgcttcatccagctttcaaagct 837
|||||||||| |||||| | |||||| |||||||||||||||| ||||||||||||
Sbjct: 374 tctagtaatccacttgatgtgaaggatgagcttgggttgcttcatcctgctttcaaagct 433
Query: 838 atcaag 843
||||||
Sbjct: 434 atcaag 439
>gnl|LJGI|TC57156 homologue to UniRef100_A7PDI4 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 1648
Score = 83.8 bits (42), Expect = 2e-15
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 286 actgggagttttctgttgaggaattgtcagtggtctttggacattcttgatgcttgggca 345
|||||||| ||||| || |||||||| |||||||||||||| | ||||||||||||||
Sbjct: 934 actgggagctttcttttcaggaattgccagtggtctttggatttgcttgatgcttgggct 993
Query: 346 ccaatggggcctaaaggg 363
|||||||| |||||||||
Sbjct: 994 ccaatgggtcctaaaggg 1011
Score = 52.0 bits (26), Expect = 6e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 122 tgctgtctcaccctgatgttgagtttctatggtggatggacagtgatgctatgttcactg 181
||||||| |||||||| || |||| | ||||||||||| ||||||||| | |||||||
Sbjct: 770 tgctgtcacaccctgaggtggagtggatttggtggatggatagtgatgcttttttcactg 829
Query: 182 acatgg 187
||||||
Sbjct: 830 acatgg 835