Miyakogusa Predicted Gene

Lj6g3v1444540.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1444540.1 tr|C1N8I6|C1N8I6_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_3024,59.57,9e-19,seg,NULL;
coiled-coil,NULL,CUFF.59497.1
         (363 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59120 similar to UniRef100_A7NW42 Cluster: Chromosome...   720   0.0  
gnl|LJGI|BP065101 similar to UniRef100_A7NW42 Cluster: Chromosom...   133   8e-31

>gnl|LJGI|TC59120 similar to UniRef100_A7NW42 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (70%)
          Length = 829

 Score =  720 bits (363), Expect = 0.0
 Identities = 363/363 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgaccctgattcatctgcgccatctcttcctctatccactaaggagaacatcact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atggctgaccctgattcatctgcgccatctcttcctctatccactaaggagaacatcact 280

                                                                       
Query: 61  cccatttcctccaaaatcgccgaactcaatgaatctagatcggagcttctcggaagaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cccatttcctccaaaatcgccgaactcaatgaatctagatcggagcttctcggaagaatt 340

                                                                       
Query: 121 cagggtttgaaacaggatttgcaaggttggagatcaaagctagatacacaggtcaaggtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cagggtttgaaacaggatttgcaaggttggagatcaaagctagatacacaggtcaaggtg 400

                                                                       
Query: 181 tatcgggatgagctgtcagaactaaagaaaactcttaatgttgaagtggagcaacttaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatcgggatgagctgtcagaactaaagaaaactcttaatgttgaagtggagcaacttaga 460

                                                                       
Query: 241 acagaatttcaagatctgaggaccactctacagcagcagcaagaggatgttactgctagc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 acagaatttcaagatctgaggaccactctacagcagcagcaagaggatgttactgctagc 520

                                                                       
Query: 301 ttaagaaacttgggtcttcaggatgtctcagcagatgtcaagaaagctgagtcccaggag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ttaagaaacttgggtcttcaggatgtctcagcagatgtcaagaaagctgagtcccaggag 580

              
Query: 361 gct 363
           |||
Sbjct: 581 gct 583


>gnl|LJGI|BP065101 similar to UniRef100_A7NW42 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 348

 Score =  133 bits (67), Expect = 8e-31
 Identities = 97/107 (90%)
 Strand = Plus / Minus

                                                                       
Query: 257 tgaggaccactctacagcagcagcaagaggatgttactgctagcttaagaaacttgggtc 316
           |||||||| |||||| || || || |||||||||||||||||||||||||||||||||||
Sbjct: 348 tgaggacccctctaccgccgccgccagaggatgttactgctagcttaagaaacttgggtc 289

                                                          
Query: 317 ttcaggatgtctcagcagatgtcaagaaagctgagtcccaggaggct 363
           |||||||||||||  | |||||| ||||||||||||||| |||||||
Sbjct: 288 ttcaggatgtctccaccgatgtccagaaagctgagtccccggaggct 242