Miyakogusa Predicted Gene

Lj6g3v1442310.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1442310.1 tr|A9T655|A9T655_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_140834,42.98,2e-17, ,CUFF.59489.1
         (591 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW613928 similar to UniRef100_A7NW35 Cluster: Chromosom...   500   e-141
gnl|LJGI|TC77342                                                      157   9e-38

>gnl|LJGI|BW613928 similar to UniRef100_A7NW35 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (20%)
          Length = 483

 Score =  500 bits (252), Expect = e-141
 Identities = 252/252 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtcaggcatttcgtcgagcatctggtagaatccgagctgcatccgaagctgacacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 atgggtcaggcatttcgtcgagcatctggtagaatccgagctgcatccgaagctgacacc 291

                                                                       
Query: 61  tcatccttgtccaggccgaagcccgccgtcgatcaccgaccaccgaccaaggttgccgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tcatccttgtccaggccgaagcccgccgtcgatcaccgaccaccgaccaaggttgccgcc 351

                                                                       
Query: 121 gacaagtcggctgagatctcgaaggccgcccaacaagacgtgttggaagctgatgatcgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gacaagtcggctgagatctcgaaggccgcccaacaagacgtgttggaagctgatgatcgt 411

                                                                       
Query: 181 cctagagttaatgtggacaacattctggaagaaagagacccctcatatgatgctatgctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cctagagttaatgtggacaacattctggaagaaagagacccctcatatgatgctatgctt 471

                       
Query: 241 ggtcagatggtt 252
           ||||||||||||
Sbjct: 472 ggtcagatggtt 483


>gnl|LJGI|TC77342 
          Length = 496

 Score =  157 bits (79), Expect = 9e-38
 Identities = 86/87 (98%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 506 ttgttcagattcagaggatcttgcaattcctatctgaacctccagaaggcagcaaagaag 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttgttcagattcagaggatcttgcaattcctatctgaacctccagaaggcagcaaagaag 60

                                      
Query: 566 ataagaacaaaacg-ccgagataaata 591
           |||||||||||||| ||||||||||||
Sbjct: 61  ataagaacaaaacgcccgagataaata 87