Miyakogusa Predicted Gene

Lj6g3v1422210.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1422210.2 tr|B9N510|B9N510_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_581778 PE=4
SV=1,65.28,3e-19,coiled-coil,NULL; seg,NULL,CUFF.59485.2
         (411 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS343186 similar to UniRef100_A7NW58 Cluster: Chromosom...   511   e-144

>gnl|LJGI|FS343186 similar to UniRef100_A7NW58 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (87%)
          Length = 801

 Score =  511 bits (258), Expect = e-144
 Identities = 258/258 (100%)
 Strand = Plus / Plus

                                                                       
Query: 33  caggttggctcaccctggtggaccattggcgacgaataaagcagcggctttggccaagtt 92
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  caggttggctcaccctggtggaccattggcgacgaataaagcagcggctttggccaagtt 147

                                                                       
Query: 93  tcttgagcggaagctgaaggaacccaatgggatggatcatattaaccctgatcttcttga 152
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tcttgagcggaagctgaaggaacccaatgggatggatcatattaaccctgatcttcttga 207

                                                                       
Query: 153 acttgctgtcaataatgccaaacagactgtttatgctagtagtgcttctacttcaaaaag 212
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 acttgctgtcaataatgccaaacagactgtttatgctagtagtgcttctacttcaaaaag 267

                                                                       
Query: 213 aactgttcgtcacgtagaattctttggtgactctgattctaaggattctgctgaagaaca 272
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aactgttcgtcacgtagaattctttggtgactctgattctaaggattctgctgaagaaca 327

                             
Query: 273 aaatgaactatcggaggt 290
           ||||||||||||||||||
Sbjct: 328 aaatgaactatcggaggt 345



 Score =  119 bits (60), Expect = 1e-26
 Identities = 60/60 (100%)
 Strand = Plus / Plus

                                                                       
Query: 352 gatgttgaggaccttggatgtgctgtggtgaaaaagcctaaacagaagtttaaatcctga 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gatgttgaggaccttggatgtgctgtggtgaaaaagcctaaacagaagtttaaatcctga 466