Miyakogusa Predicted Gene
- Lj6g3v1421120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1421120.1 tr|A9SKM6|A9SKM6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_165447,23.51,4e-16,Glyco_transf_92,Domain of unknown
function DUF23; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL,CUFF.59483.1
(1146 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62978 similar to UniRef100_A7PN53 Cluster: Chromosome... 854 0.0
gnl|LJGI|TC63312 similar to UniRef100_A7PN53 Cluster: Chromosome... 702 0.0
gnl|LJGI|TC61657 similar to UniRef100_A7QPJ4 Cluster: Chromosome... 676 0.0
gnl|LJGI|GO035255 similar to UniRef100_A9RY08 Cluster: Predicted... 270 2e-71
>gnl|LJGI|TC62978 similar to UniRef100_A7PN53 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 711
Score = 854 bits (431), Expect = 0.0
Identities = 431/431 (100%)
Strand = Plus / Plus
Query: 716 agactgtgcttgattcactctctgagtataatcagttcaccattgaacagatgccaatga 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agactgtgcttgattcactctctgagtataatcagttcaccattgaacagatgccaatga 60
Query: 776 gtagtaaactctgcctctcttctgattatggaaaaacatacaggaaatggggttttgaga 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtagtaaactctgcctctcttctgattatggaaaaacatacaggaaatggggttttgaga 120
Query: 836 agtttgtgtacaaagatgtgaagaagggaattaggagggatagaaaatatgcggtgcaac 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtttgtgtacaaagatgtgaagaagggaattaggagggatagaaaatatgcggtgcaac 180
Query: 896 cgcgtagcttgtatgcaacaggggttcacatgtcacagaatctggaaggaaaaacaactc 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcgtagcttgtatgcaacaggggttcacatgtcacagaatctggaaggaaaaacaactc 240
Query: 956 acaaaactgaaggaaagataaaatatttccactaccatggaaccatagcagcaagaagag 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaaaactgaaggaaagataaaatatttccactaccatggaaccatagcagcaagaagag 300
Query: 1016 aatcatgtaaaatgctaataaattcaacagaaatcacatatgacaagaatccctatgtgt 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatcatgtaaaatgctaataaattcaacagaaatcacatatgacaagaatccctatgtgt 360
Query: 1076 tggataccaccatgagggacatagctggtgtgataaagaaatttgagctcaagatgattg 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggataccaccatgagggacatagctggtgtgataaagaaatttgagctcaagatgattg 420
Query: 1136 gagacaggcta 1146
|||||||||||
Sbjct: 421 gagacaggcta 431
>gnl|LJGI|TC63312 similar to UniRef100_A7PN53 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 673
Score = 702 bits (354), Expect = 0.0
Identities = 354/354 (100%)
Strand = Plus / Plus
Query: 624 tgattgcttgcataggtacaagttcatggggaaatggatgttcttctttgatgtggatga 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 tgattgcttgcataggtacaagttcatggggaaatggatgttcttctttgatgtggatga 99
Query: 684 gttcatctatgttccacctaagagtactattaagactgtgcttgattcactctctgagta 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gttcatctatgttccacctaagagtactattaagactgtgcttgattcactctctgagta 159
Query: 744 taatcagttcaccattgaacagatgccaatgagtagtaaactctgcctctcttctgatta 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 taatcagttcaccattgaacagatgccaatgagtagtaaactctgcctctcttctgatta 219
Query: 804 tggaaaaacatacaggaaatggggttttgagaagtttgtgtacaaagatgtgaagaaggg 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tggaaaaacatacaggaaatggggttttgagaagtttgtgtacaaagatgtgaagaaggg 279
Query: 864 aattaggagggatagaaaatatgcggtgcaaccgcgtagcttgtatgcaacaggggttca 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aattaggagggatagaaaatatgcggtgcaaccgcgtagcttgtatgcaacaggggttca 339
Query: 924 catgtcacagaatctggaaggaaaaacaactcacaaaactgaaggaaagataaa 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 catgtcacagaatctggaaggaaaaacaactcacaaaactgaaggaaagataaa 393
Score = 81.8 bits (41), Expect = 9e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 481 gtgattcatgatgctggtggggttcatgagcaggtgcgtga 521
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtgattcatgatgctggtggggttcatgagcaggtgcgtga 42
Score = 79.8 bits (40), Expect = 3e-14
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 1107 gataaagaaatttgagctcaagatgattggagacaggcta 1146
||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gataaagaaatttgagctcaagatgattggagacaggcta 427
>gnl|LJGI|TC61657 similar to UniRef100_A7QPJ4 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 861
Score = 676 bits (341), Expect = 0.0
Identities = 356/361 (98%)
Strand = Plus / Plus
Query: 1 atgggcgcttacagaggaggactcaacacgttcgccattgtcggcctcgcttcgaagccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgggcgcttacagaggaggactcaacacgttcgccattgtcggcctcgcttcgaagccg 560
Query: 61 cttcatgtttacagcaaaccgacttaccagtgtgagtgggtccctctcaccggcgccgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcatgtttacagcaaaccgacttaccagtgtgagtgggtccctctcaccggcgccgga 620
Query: 121 gaaaacaacaccgtcaccaccgtcgggtacaagatcctccctgactggggctacggccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaaacaacaccgtcaccaccgtcgggtacaagatcctccctgactggggctacggccat 680
Query: 181 gtctacaccgtcgtggtagtcaactgcacgttcccggtgccgctcaacgttgaaaactcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtctacaccgtcgtggtagtcaactgcacgttcccggtgccgctcaacgttgaaaactcc 740
Query: 241 ggcgggaagctaatcctctacgcctccaaatccggcggaggcaacgccagccgcaacatc 300
|||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 741 ggcgggaagctaatcctctacgcctccacctccggcggaggcgacgccagccgcaacatc 800
Query: 301 accaacaggatggaagttctcacggaggcgccggggactctcgacactgccctcttcacc 360
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 accgaccggatggaagttctcacggaggcgccggggactctcgacactgccctcttcacc 860
Query: 361 t 361
|
Sbjct: 861 t 861
>gnl|LJGI|GO035255 similar to UniRef100_A9RY08 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(11%)
Length = 147
Score = 270 bits (136), Expect = 2e-71
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 567 tatcagggaccaagagagatttgatgggtattatcacaaccagttcatggtggtgaatga 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tatcagggaccaagagagatttgatgggtattatcacaaccagttcatggtggtgaatga 61
Query: 627 ttgcttgcataggtacaagttcatggggaaatggatgttcttctttgatgtggatgagtt 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttgcttgcataggtacaagttcatggggaaatggatgttcttctttgatgtggatgagtt 121
Query: 687 catctatgttccacct 702
||||||||||||||||
Sbjct: 122 catctatgttccacct 137