Miyakogusa Predicted Gene
- Lj6g3v1412740.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1412740.1 tr|G7INF0|G7INF0_MEDTR Cellulose synthase
OS=Medicago truncatula GN=MTR_2g035780 PE=4
SV=1,83.66,0,Cellulose_synt,Cellulose synthase; CELLULOSE
SYNTHASE-RELATED,NULL; X-BOX TRANSCRIPTION FACTOR-RELAT,CUFF.60084.1
(1098 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78817 similar to UniRef100_A7Q1M3 Cluster: Chromosome... 1564 0.0
gnl|LJGI|FS345328 homologue to UniRef100_Q6J8X2 Cluster: Cellulo... 404 e-112
gnl|LJGI|TC66434 similar to UniRef100_Q6DUJ2 Cluster: CesA2; n=1... 66 5e-10
gnl|LJGI|AV410357 homologue to UniRef100_Q2IB40 Cluster: Cellulo... 54 2e-06
gnl|LJGI|TC82583 similar to UniRef100_A7PFP0 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|TC78817 similar to UniRef100_A7Q1M3 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 822
Score = 1564 bits (789), Expect = 0.0
Identities = 792/793 (99%)
Strand = Plus / Plus
Query: 1 atggcctcaaactccatggctggcttcatcactggttctcattctcattcccaactctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 atggcctcaaactccatggctggcttcatcactggttctcattctcattcccaactctca 89
Query: 61 cttgattctgatgagcatcagcctcctcctccttctcatcaaccttcatcgaaaacatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 cttgattctgatgagcatcagcctcctcctccttctcatcaaccttcatcgaaaacatgt 149
Query: 121 cgagtttgtggtgatgaggttggaattaaggaagatggggagctttttgtggcttgtcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 cgagtttgtggtgatgaggttggaattaaggaagatggggagctttttgtggcttgtcat 209
Query: 181 gtgtgtggatttcctgtttgccgaccttgttatgagtatgagaggagtgaagggaaccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gtgtgtggatttcctgtttgccgaccttgttatgagtatgagaggagtgaagggaaccag 269
Query: 241 tgctgccctcaatgcagcactcgctataagcgtcacaaaggttgtcctagagtggctgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgctgccctcaatgcagcactcgctataagcgtcacaaaggttgtcctagagtggctgga 329
Query: 301 gatgaagaggataactttgatgcagatgattttgaggatgaatttcagcttaagaatcgt 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gatgaaaaggataactttgatgcagatgattttgaggatgaatttcagcttaagaatcgt 389
Query: 361 catgatgatctagatcagcaccgtgatggaagtcatgtggaaaatggggactacaatcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 catgatgatctagatcagcaccgtgatggaagtcatgtggaaaatggggactacaatcaa 449
Query: 421 cagaaattgcattccaatggccaagttttctcttcagcaggaagtgtcactggcaaggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cagaaattgcattccaatggccaagttttctcttcagcaggaagtgtcactggcaaggat 509
Query: 481 tttgaaggggagaaagatctcaacagtaatgcagaatggcaagaaagagtagagaaatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tttgaaggggagaaagatctcaacagtaatgcagaatggcaagaaagagtagagaaatgg 569
Query: 541 aaagtcaggcaagaaaagaaaggtctactaaacaaagaggaggggaaagaagatccaggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aaagtcaggcaagaaaagaaaggtctactaaacaaagaggaggggaaagaagatccaggt 629
Query: 601 gaagatgatgattatcttttggctgaagctaggcaaccactgtggcgaaaggttccaata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gaagatgatgattatcttttggctgaagctaggcaaccactgtggcgaaaggttccaata 689
Query: 661 tcttcaagcttaatcaatccataccgcatagtaattgtgatgaggctggttatcctagct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tcttcaagcttaatcaatccataccgcatagtaattgtgatgaggctggttatcctagct 749
Query: 721 ttcttctttcgattccgtatcttaacaccagcatatgatgcatatcccttgtggcttatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ttcttctttcgattccgtatcttaacaccagcatatgatgcatatcccttgtggcttatc 809
Query: 781 tctgtgatatgtg 793
|||||||||||||
Sbjct: 810 tctgtgatatgtg 822
>gnl|LJGI|FS345328 homologue to UniRef100_Q6J8X2 Cluster: Cellulose synthase; n=1;
Populus tremula x Populus tremuloides|Rep: Cellulose
synthase - Populus tremula x Populus tremuloides, partial
(22%)
Length = 704
Score = 404 bits (204), Expect = e-112
Identities = 204/204 (100%)
Strand = Plus / Minus
Query: 895 gaaggcgagccaaaccagctttccccagttgatgtctatgtgagtactgtggaccctttg 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gaaggcgagccaaaccagctttccccagttgatgtctatgtgagtactgtggaccctttg 645
Query: 955 aaggaaccaccaattataacagcaaacactgttctgtcaatcctctctgttgattaccct 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aaggaaccaccaattataacagcaaacactgttctgtcaatcctctctgttgattaccct 585
Query: 1015 gtggacaaggtcagctgctatgtctcagatgatggtgcttcaatgcttctgtttgattca 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gtggacaaggtcagctgctatgtctcagatgatggtgcttcaatgcttctgtttgattca 525
Query: 1075 ctggcagaaactgctgagtttgca 1098
||||||||||||||||||||||||
Sbjct: 524 ctggcagaaactgctgagtttgca 501
>gnl|LJGI|TC66434 similar to UniRef100_Q6DUJ2 Cluster: CesA2; n=1; Acacia mangium|Rep:
CesA2 - Acacia mangium, partial (71%)
Length = 2954
Score = 65.9 bits (33), Expect = 5e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 758 atgcatatcccttgtggcttatctctgtgatatgtgagatatggtttgcactgtcatgga 817
|||||||| | |||||| | || ||||| || |||||||| |||||||| | |||||||
Sbjct: 1210 atgcatatgcattgtggttgatatctgttatctgtgagatttggtttgccatatcatgga 1269
Query: 818 tacttgatcagttccccaagtggct 842
|| ||||||| ||||||||||||||
Sbjct: 1270 tatttgatcaattccccaagtggct 1294
>gnl|LJGI|AV410357 homologue to UniRef100_Q2IB40 Cluster: Cellulose synthase 4; n=1;
Eucalyptus grandis|Rep: Cellulose synthase 4 - Eucalyptus
grandis (Flooded gum), partial (11%)
Length = 362
Score = 54.0 bits (27), Expect = 2e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1003 gttgattaccctgtggacaaggtcagctgctatgtctcagatgatggtgct 1053
||||| ||||| ||||| |||||| |||||||||||| ||||||||||||
Sbjct: 144 gttgactacccagtggataaggtctcctgctatgtctctgatgatggtgct 194
>gnl|LJGI|TC82583 similar to UniRef100_A7PFP0 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 969
Score = 54.0 bits (27), Expect = 2e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 790 tgtgagatatggtttgcactgtcatggatacttgatcagttccccaa 836
|||||||| ||||||||| || ||||||| ||||||||||| |||||
Sbjct: 870 tgtgagatctggtttgcattgacatggattcttgatcagtttcccaa 916