Miyakogusa Predicted Gene

Lj6g3v1412710.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1412710.1 tr|B2KZH0|B2KZH0_PICAB Quartet 3 (Fragment)
OS=Picea abies GN=QRT3 PE=2
SV=1,64.44,0.000000002,seg,NULL,gene.g66187.t1.1
         (579 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP053226 weakly similar to UniRef100_A7P2N3 Cluster: Ch...   168   2e-41

>gnl|LJGI|BP053226 weakly similar to UniRef100_A7P2N3 Cluster: Chromosome chr1
           scaffold_5, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (38%)
          Length = 531

 Score =  168 bits (85), Expect = 2e-41
 Identities = 218/263 (82%), Gaps = 3/263 (1%)
 Strand = Plus / Minus

                                                                       
Query: 277 cttgatgggcaattcagtagcattgaccaagtggtgattgataggaacaatgtgtatggt 336
           ||||||||| | || |||| |||||| ||||||||||||||||| ||| ||||| |||| 
Sbjct: 390 cttgatggggagtttagtaacattgatcaagtggtgattgatagaaacnatgtgaatgg- 332

                                                                       
Query: 337 agcatgagtttgagatcaacggtttccaagttgactgtggctggaaatggctcaaaatgg 396
             |||| | ||||||||||| |||   ||||| ||||||  |||||||||  | || |||
Sbjct: 331 --catggggttgagatcaaccgttggaaagttaactgtgagtggaaatgggacnaagtgg 274

                                                                       
Query: 397 gtggctgatttttcaaatgttttggtgtttcctaatcggattagtcattttcagtattca 456
           |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gtggctgatttttcatcagttttggtgtttcctaatcggattagtcattttcagtattca 214

                                                                       
Query: 457 ttttactctcagggggagcctaagttcttggcacattcagtgaccaatgtgtcaaataat 516
           || ||  |||  |  ||||||||||| || ||||| || |||||| |||||||| |||||
Sbjct: 213 ttctatgctcnagaagagcctaagtttttagcacactctgtgaccnatgtgtcagataat 154

                                  
Query: 517 gttgtggtggtggaaagtgagaa 539
           || ||  | ||||| ||||||||
Sbjct: 153 gtggtcattgtggagagtgagaa 131