Miyakogusa Predicted Gene

Lj6g3v1392570.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1392570.1 tr|A9VBI3|A9VBI3_MONBE Predicted protein
OS=Monosiga brevicollis GN=29580 PE=4
SV=1,26.72,0.000000000000007,seg,NULL; Pectin lyase-like,Pectin lyase
fold/virulence factor; Beta_helix,NULL,gene.g66174.t1.1
         (1075 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP053226 weakly similar to UniRef100_A7P2N3 Cluster: Ch...   168   5e-41

>gnl|LJGI|BP053226 weakly similar to UniRef100_A7P2N3 Cluster: Chromosome chr1
            scaffold_5, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (38%)
          Length = 531

 Score =  168 bits (85), Expect = 5e-41
 Identities = 218/263 (82%), Gaps = 3/263 (1%)
 Strand = Plus / Minus

                                                                        
Query: 775  cttgatgggcaattcagtagcattgaccaagtggtgattgataggaacaatgtgtatggt 834
            ||||||||| | || |||| |||||| ||||||||||||||||| ||| ||||| |||| 
Sbjct: 390  cttgatggggagtttagtaacattgatcaagtggtgattgatagaaacnatgtgaatgg- 332

                                                                        
Query: 835  agcatgagtttgagatcaacggtttccaagttgactgtggctggaaatggctcaaaatgg 894
              |||| | ||||||||||| |||   ||||| ||||||  |||||||||  | || |||
Sbjct: 331  --catggggttgagatcaaccgttggaaagttaactgtgagtggaaatgggacnaagtgg 274

                                                                        
Query: 895  gtggctgatttttcaaatgttttggtgtttcctaatcggattagtcattttcagtattca 954
            |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273  gtggctgatttttcatcagttttggtgtttcctaatcggattagtcattttcagtattca 214

                                                                        
Query: 955  ttttactctcagggggagcctaagttcttggcacattcagtgaccaatgtgtcaaataat 1014
            || ||  |||  |  ||||||||||| || ||||| || |||||| |||||||| |||||
Sbjct: 213  ttctatgctcnagaagagcctaagtttttagcacactctgtgaccnatgtgtcagataat 154

                                   
Query: 1015 gttgtggtggtggaaagtgagaa 1037
            || ||  | ||||| ||||||||
Sbjct: 153  gtggtcattgtggagagtgagaa 131