Miyakogusa Predicted Gene
- Lj6g3v1392520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1392520.1 CUFF.59457.1
(762 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62500 weakly similar to UniRef100_A9RG23 Cluster: Pre... 1487 0.0
gnl|LJGI|FS326699 weakly similar to UniRef100_A9RG23 Cluster: Pr... 825 0.0
gnl|LJGI|TC68096 similar to UniRef100_A9RG23 Cluster: Predicted ... 743 0.0
>gnl|LJGI|TC62500 weakly similar to UniRef100_A9RG23 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(81%)
Length = 1307
Score = 1487 bits (750), Expect = 0.0
Identities = 759/762 (99%)
Strand = Plus / Plus
Query: 1 atgtcaatattggctagactgcgctgtgtcactgtagatgttaccggcaccctaatggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 atgtcaatattggctagactgcgctgtgtcactgtagatgttaccggcaccctaatggct 298
Query: 61 tacaaaggggagcttggtgactattattgcatggccgctaaagctgctggccatccgtgc 120
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 299 tacaaaggggagcttggtgactattattgcatggtcgctaaagctgctggccatccgtac 358
Query: 121 ccagactacaaacgtgtacatgagggatttaagcttgcatataaggacatggcaaagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ccagactacaaacgtgtacatgagggatttaagcttgcatataaggacatggcaaagaag 418
Query: 181 tatccctgtttcgggtttggagccaaaatgccgaacattgtgtggtggaaaacctgcgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tatccctgtttcgggtttggagccaaaatgccgaacattgtgtggtggaaaacctgcgtg 478
Query: 241 cgtgattcttttgtcagggctggatatgaatatgatgaggaaacatttgagaaaattttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cgtgattcttttgtcagggctggatatgaatatgatgaggaaacatttgagaaaattttc 538
Query: 301 agacgcatatatgcatcttttgggtcatctgctccttatactgtctttccggactcccga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 agacgcatatatgcatcttttgggtcatctgctccttatactgtctttccggactcccga 598
Query: 361 ccatttcttagatggcttcgtggaaagggtgtcaaagttggcctcgtgagcaatgcagag 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 599 ccatttcttagatggcttcgtggaaagggtgtcgaagttggcctcgtgagcaatgcagag 658
Query: 421 tatcgatatccagatgtgattcttccagctatgggtataaatgagggatctgagtgggac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tatcgatatccagatgtgattcttccagctatgggtataaatgagggatctgagtgggac 718
Query: 481 tttggcgtgttttctggtcttgaaggcgttgagaagccaaacccaaaaatttatgagatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tttggcgtgttttctggtcttgaaggcgttgagaagccaaacccaaaaatttatgagatt 778
Query: 541 gcacttgagagggctggaaatattaaacctgaagaaactttgcatattggcgatagcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gcacttgagagggctggaaatattaaacctgaagaaactttgcatattggcgatagcatg 838
Query: 601 cggaaagactatgagccagctaagagcatagggatgcatgcactattgttggacagattc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 cggaaagactatgagccagctaagagcatagggatgcatgcactattgttggacagattc 898
Query: 661 aagacaccagatgctgatgagtggaggaaatctggggcagttgttcttcccgatttggag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 aagacaccagatgctgatgagtggaggaaatctggggcagttgttcttcccgatttggag 958
Query: 721 gcaacacaagaatggctttcttcagaaaagtcatcttggtag 762
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 gcaacacaagaatggctttcttcagaaaagtcatcttggtag 1000
>gnl|LJGI|FS326699 weakly similar to UniRef100_A9RG23 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(50%)
Length = 741
Score = 825 bits (416), Expect = 0.0
Identities = 416/416 (100%)
Strand = Plus / Plus
Query: 1 atgtcaatattggctagactgcgctgtgtcactgtagatgttaccggcaccctaatggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atgtcaatattggctagactgcgctgtgtcactgtagatgttaccggcaccctaatggct 385
Query: 61 tacaaaggggagcttggtgactattattgcatggccgctaaagctgctggccatccgtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tacaaaggggagcttggtgactattattgcatggccgctaaagctgctggccatccgtgc 445
Query: 121 ccagactacaaacgtgtacatgagggatttaagcttgcatataaggacatggcaaagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccagactacaaacgtgtacatgagggatttaagcttgcatataaggacatggcaaagaag 505
Query: 181 tatccctgtttcgggtttggagccaaaatgccgaacattgtgtggtggaaaacctgcgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tatccctgtttcgggtttggagccaaaatgccgaacattgtgtggtggaaaacctgcgtg 565
Query: 241 cgtgattcttttgtcagggctggatatgaatatgatgaggaaacatttgagaaaattttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cgtgattcttttgtcagggctggatatgaatatgatgaggaaacatttgagaaaattttc 625
Query: 301 agacgcatatatgcatcttttgggtcatctgctccttatactgtctttccggactcccga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 agacgcatatatgcatcttttgggtcatctgctccttatactgtctttccggactcccga 685
Query: 361 ccatttcttagatggcttcgtggaaagggtgtcaaagttggcctcgtgagcaatgc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ccatttcttagatggcttcgtggaaagggtgtcaaagttggcctcgtgagcaatgc 741
>gnl|LJGI|TC68096 similar to UniRef100_A9RG23 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(41%)
Length = 693
Score = 743 bits (375), Expect = 0.0
Identities = 382/383 (99%), Gaps = 1/383 (0%)
Strand = Plus / Plus
Query: 1 atgtcaatattggctagactgcgctgtgtcactgtagatgttaccggcaccctaatggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atgtcaatattggctagactgcgctgtgtcactgtagatgttaccggcaccctaatggct 371
Query: 61 tacaaaggggagcttggtgactattattgcatggccgctaaagctgctggccatccgtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tacaaaggggagcttggtgactattattgcatggccgctaaagctgctggccatccgtgc 431
Query: 121 ccagactacaaacgtgtacatgagggatttaagcttgcatataaggacatggcaaagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ccagactacaaacgtgtacatgagggatttaagcttgcatataaggacatggcaaagaag 491
Query: 181 tatccctgtttcgggtttggagccaaaatgccgaacattgtgtggtggaaaacctgcgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tatccctgtttcgggtttggagccaaaatgccgaacattgtgtggtggaaaacctgcgtg 551
Query: 241 cgtgattcttttgtcagggctggatatgaatatgatgaggaaacatttgagaaaattttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cgtgattcttttgtcagggctggatatgaatatgatgaggaaacatttgagaaaattttc 611
Query: 301 agacgcatatatgcatcttttgggtcatctgctccttatactgtctttccggactcccga 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 612 agacgcatatatgcatcttttgggtcatctgctccttatactgtcttt-cggactcccga 670
Query: 361 ccatttcttagatggcttcgtgg 383
|||||||||||||||||||||||
Sbjct: 671 ccatttcttagatggcttcgtgg 693