Miyakogusa Predicted Gene
- Lj6g3v1382270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1382270.1 tr|F6M9W9|F6M9W9_SOYBN Filamentation
temperature-sensitive H OS=Glycine max GN=FtsH9 PE=2
SV=1,90.45,0,P-loop containing nucleoside triphosphate
hydrolases,NULL; FtsH protease domain-like,NULL;
FtsH,Pept,CUFF.59455.1
(2079 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67783 homologue to UniRef100_A7PJL7 Cluster: Chromoso... 1352 0.0
gnl|LJGI|BG662366 homologue to UniRef100_A7PJL7 Cluster: Chromos... 870 0.0
gnl|LJGI|BW622728 similar to UniRef100_A7PJL7 Cluster: Chromosom... 676 0.0
gnl|LJGI|TC74775 homologue to UniRef100_A7PJL7 Cluster: Chromoso... 662 0.0
gnl|LJGI|TC82227 homologue to UniRef100_A7PJL7 Cluster: Chromoso... 355 7e-97
gnl|LJGI|AV779762 similar to UniRef100_A7PJL7 Cluster: Chromosom... 111 2e-23
>gnl|LJGI|TC67783 homologue to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 1543
Score = 1352 bits (682), Expect = 0.0
Identities = 1159/1316 (88%), Gaps = 9/1316 (0%)
Strand = Plus / Plus
Query: 208 aatgtgggagttggcttacctgcattattaggaaatgggaaagcttatgcggatgagcag 267
|||||||||||||| ||||| |||||||| ||| ||| || |||||||| || || ||
Sbjct: 231 aatgtgggagttggattaccagcattattgggaggtggcaaggcttatgctgacgaacaa 290
Query: 268 gggatttctccctccaaaatgtcttattctcagtttcttgagtatttggataaggataga 327
||| |||| |||||| ||||||||||||| |||||| ||||||||||| ||||| ||
Sbjct: 291 ggggtttcctcctccagaatgtcttattctaggtttctagagtatttggacaaggacagg 350
Query: 328 gttaaaaaagtggatctgtttgagaatggaactatagctattgtagaggctctttctctt 387
||||| ||||||||||||| |||||||||||| ||||||||||| ||||| |||||| |
Sbjct: 351 gttaacaaagtggatctgtatgagaatggaaccatagctattgttgaggcagtttctcct 410
Query: 388 ga------taatagggcgctgcgaatgcgagttcaacttcctggacttagccaagagctc 441
|| ||| ||| || ||| | ||||||||||||||||||| ||||||||||
Sbjct: 411 gagttgggtaacaggttgcagcgtgttaaggttcaacttcctggacttaaccaagagctc 470
Query: 442 cttcagaaactcagggaaaagaacattgactttgcagctcataatgcccaagaagagtcg 501
||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| || ||
Sbjct: 471 cttcagaaattcagggaaaagaacattgactttgcagctcacaatgctcaagaggattca 530
Query: 502 gattctctgttatttaacctgattgggaatctggctttccctctaatcttgattggagga 561
| |||||| || |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 531 ggttctcttttgtttaacctgattgggaatctggctttccctataatcttgattggaggg 590
Query: 562 ttgttccttttgtcaagacgatcatcaggagggatgggaggtcctggtgggcctggcttt 621
||||||||| | || || || | || |||||||||||||| ||||| ||||| |||
Sbjct: 591 ttgttccttct--cacgaggaggccc-ggtgggatgggaggtcccggtggccctggattt 647
Query: 622 cctcttgcttttggtcagtctaaagccaaatttcaaatggaaccaaatactggtgtgaca 681
|||||| |||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||
Sbjct: 648 cctcttactttcggtcaatctaaagccaagtttcagatggaaccaaacactggagtgaca 707
Query: 682 tttgatgatgttgccggggtagatgaagccaagcaggattttatggaggtggtggagttt 741
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 708 tttgatgatgttgccggggtggatgaagccaagcaggattttatggaagtggtggagttt 767
Query: 742 ctgaagaagcctgagaggttcactgctgttggagctcgcataccaaaaggagttcttctt 801
|| ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct: 768 ctcaagaagcctgagaggtttactgctgtcggagctcgcatacctaaaggagttcttctt 827
Query: 802 attggtcctccagggactgggaagacgctattagccaaggctattgctggtgaagcaggt 861
||||||||||| || ||||||||||| | ||||||||||||||||| |||||||| ||
Sbjct: 828 attggtcctcccggaactgggaagaccttgttagccaaggctattgccggtgaagccgga 887
Query: 862 gtcccatttttctcaatctcaggttctgagtttgttgagatgtttgttggtattggtgct 921
|| || ||||||||||| || |||||||||||||||||||||||||||||| |||| |||
Sbjct: 888 gttccgtttttctcaatatctggttctgagtttgttgagatgtttgttggtgttggcgct 947
Query: 922 tctcgagttcgtgatttattcaagaaggccaaagagaatgctccctgcattgtttttgtt 981
|||||||| |||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 948 tctcgagtccgtgatttgttcaagaaggccaaagagaatgccccttgcattgtctttgtt 1007
Query: 982 gatgaaattgatgctgttggaaggcaaagaggtgctggaattggcggaggaaatgatgaa 1041
|||||||||||||||||||| || |||||||| |||||||||| ||||| |||||||||
Sbjct: 1008 gatgaaattgatgctgttgggagacaaagagggactggaattggtggagggaatgatgaa 1067
Query: 1042 agagaacagaccctgaaccaacttctgacagaaatggacgggtttgagggtaatactggt 1101
|||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 1068 agagaacagaccctcaaccaacttttgacagaaatggatgggtttgagggtaataccggt 1127
Query: 1102 atcatagtcgttgcagcaactaacaggccagacattctggactctgctttattgcgacca 1161
||||| |||||||| |||||||||||| | |||||||| |||||||| ||| || ||||
Sbjct: 1128 atcattgtcgttgctgcaactaacagggccgacattcttgactctgccttactgagacct 1187
Query: 1162 ggacggtttgatagacaagtctcagttgatgtcccagatatacggggaaggactgaaatc 1221
|| |||||||||||||| || |||||||| || ||| || ||||||||||||| |||
Sbjct: 1188 ggccggtttgatagacaggtaatggttgatgttccggatgtaaggggaaggactgagatc 1247
Query: 1222 ctaaaggttcacgcgagcaataaaaagtttgatgctgatgtttctcttgaggtaattgca 1281
||||||||||| | ||||| ||||||||||| |||||||| |||||||| ||||||||
Sbjct: 1248 ctaaaggttcatggtagcaacaaaaagtttgaagctgatgtctctcttgaaataattgca 1307
Query: 1282 atgagaacacctggttttagtggagctgatcttgcaaacctcttgaatgaagctgctata 1341
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 1308 atgagaacacctggttttagtggagctgatcttgcaaatctcttgaacgaagctgctata 1367
Query: 1342 ttagctggtcggcgtggaaaaacggcaattgcatccaaagagatcgatgattctattgat 1401
|||||||||||||||||||| || | ||| |||| |||||||| |||||||||||||||
Sbjct: 1368 ttagctggtcggcgtggaaagacagggatttcatctaaagagattgatgattctattgat 1427
Query: 1402 aggattgttgctggaatggaagggacagtgatgacagatggaaagagcaaaagtctagtt 1461
|||||||| |||||||||||||| ||||||||||||||||| |||||||||||| ||||
Sbjct: 1428 aggattgtagctggaatggaaggaacagtgatgacagatgggaagagcaaaagtttagtg 1487
Query: 1462 gcatatcatgaagttgggcatgccatttgtggaactttgactcccggtcacgatgc 1517
||||||||||||||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 1488 gcatatcatgaagttgggcatgccatttgtggaactttgacccctggtcatgatgc 1543
>gnl|LJGI|BG662366 homologue to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 439
Score = 870 bits (439), Expect = 0.0
Identities = 439/439 (100%)
Strand = Plus / Plus
Query: 1584 tgacccaactctgatctccaaacaacaactctttgcaagaattgttggtggactaggtgg 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacccaactctgatctccaaacaacaactctttgcaagaattgttggtggactaggtgg 60
Query: 1644 cagagcagcagaggaaattatttttggcgagcctgaggttacaactggagcagctggcga 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagagcagcagaggaaattatttttggcgagcctgaggttacaactggagcagctggcga 120
Query: 1704 tttgcagcaaataaccggcttggccaaacagatggtaaccacgtttggaatgtctgatat 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttgcagcaaataaccggcttggccaaacagatggtaaccacgtttggaatgtctgatat 180
Query: 1764 tggtccttggtcacttatggacacatcagctcagagtggtgatgtcatcatgagaatgat 1823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtccttggtcacttatggacacatcagctcagagtggtgatgtcatcatgagaatgat 240
Query: 1824 ggcaagaaactcgatgtcagaaaggcttgccgaagacattgatgctgctgtcaagaggat 1883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcaagaaactcgatgtcagaaaggcttgccgaagacattgatgctgctgtcaagaggat 300
Query: 1884 ctcagatgaagcgtatgaaatcgcactgaagcatataaggaacaaccgtgaagccatgga 1943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctcagatgaagcgtatgaaatcgcactgaagcatataaggaacaaccgtgaagccatgga 360
Query: 1944 taagattgtggaggtcttactggagaaggagacaatgactggagatgaattccgagctct 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taagattgtggaggtcttactggagaaggagacaatgactggagatgaattccgagctct 420
Query: 2004 cctgtccgagtttgttgaa 2022
|||||||||||||||||||
Sbjct: 421 cctgtccgagtttgttgaa 439
>gnl|LJGI|BW622728 similar to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 479
Score = 676 bits (341), Expect = 0.0
Identities = 347/349 (99%)
Strand = Plus / Plus
Query: 1 atggcggcggcatcattgtcatgtcttgttgggagtagtttatctacgccgagtaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atggcggcggcatcattgtcatgtcttgttgggagtagtttatctacgccgagtaataaa 190
Query: 61 ttaactcttgccaagggtgtaaatgggagacaactcttcttatttcagagactttcatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttaactcttgccaagggtgtaaatgggagacaactcttcttatttcagagactttcatca 250
Query: 121 ttgagtatggagtcaaaaacagtgcttgtaaaggcatccttggatcaaaggaaacatgaa 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 251 ttgagtatggagtcaaaaacagtgcttgtaaaggcatccttagatcaaaggaaacatgaa 310
Query: 181 gggagaagaaagtttctgaaactgttgaatgtgggagttggcttacctgcattattagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gggagaagaaagtttctgaaactgttgaatgtgggagttggcttacctgcattattagga 370
Query: 241 aatgggaaagcttatgcggatgagcaggggatttctccctccaaaatgtcttattctcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aatgggaaagcttatgcggatgagcaggggatttctccctccaaaatgtcttattctcag 430
Query: 301 tttcttgagtatttggataaggatagagttaaaaaagtggatctgtttg 349
|||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 431 tttcttgagtatttggataaggatagagttaaaaaagtggatctatttg 479
>gnl|LJGI|TC74775 homologue to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 451
Score = 662 bits (334), Expect = 0.0
Identities = 334/334 (100%)
Strand = Plus / Plus
Query: 1746 gtttggaatgtctgatattggtccttggtcacttatggacacatcagctcagagtggtga 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtttggaatgtctgatattggtccttggtcacttatggacacatcagctcagagtggtga 61
Query: 1806 tgtcatcatgagaatgatggcaagaaactcgatgtcagaaaggcttgccgaagacattga 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgtcatcatgagaatgatggcaagaaactcgatgtcagaaaggcttgccgaagacattga 121
Query: 1866 tgctgctgtcaagaggatctcagatgaagcgtatgaaatcgcactgaagcatataaggaa 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgctgctgtcaagaggatctcagatgaagcgtatgaaatcgcactgaagcatataaggaa 181
Query: 1926 caaccgtgaagccatggataagattgtggaggtcttactggagaaggagacaatgactgg 1985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 caaccgtgaagccatggataagattgtggaggtcttactggagaaggagacaatgactgg 241
Query: 1986 agatgaattccgagctctcctgtccgagtttgttgaaattccagctgaaaatcgggtccc 2045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agatgaattccgagctctcctgtccgagtttgttgaaattccagctgaaaatcgggtccc 301
Query: 2046 tccttcaactccctcaccagttgctgtttgaata 2079
||||||||||||||||||||||||||||||||||
Sbjct: 302 tccttcaactccctcaccagttgctgtttgaata 335
>gnl|LJGI|TC82227 homologue to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 545
Score = 355 bits (179), Expect = 7e-97
Identities = 334/385 (86%), Gaps = 3/385 (0%)
Strand = Plus / Plus
Query: 1666 tttggcgagcctgaggttacaactggagcagctggcgatttgcagcaaataaccggcttg 1725
||||| ||||| ||||||||||||||||||||||| |||||||||||||| || || |||
Sbjct: 1 tttggtgagccagaggttacaactggagcagctggtgatttgcagcaaatcactggtttg 60
Query: 1726 gccaaacagatggtaaccacgtttggaatgtctgatattggtccttggtcacttatggac 1785
|| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 61 gcaaaacagatggtaaccacatttggaatgtctgatattggtccttggtcactcatgga- 119
Query: 1786 acatcagctcagagtggtgatgtcatcatgagaatgatggcaagaaactcgatgtcagaa 1845
| |||| || ||||| || || |||||||||||||||||||| |||||||||||||||
Sbjct: 120 --agcagcacaaagtggagacgttatcatgagaatgatggcaaggaactcgatgtcagaa 177
Query: 1846 aggcttgccgaagacattgatgctgctgtcaagaggatctcagatgaagcgtatgaaatc 1905
| |||||| |||||||||||||||||| |||||||||||||||||| || |||| ||||
Sbjct: 178 aagcttgcagaagacattgatgctgctaccaagaggatctcagatgatgcatatgtaatc 237
Query: 1906 gcactgaagcatataaggaacaaccgtgaagccatggataagattgtggaggtcttactg 1965
|||||| |||||||| |||||||| || || || || ||||||||||| ||| | |||
Sbjct: 238 gcactgcgccatataagaaacaaccgcgaggcaattgacaagattgtggaagtccttctg 297
Query: 1966 gagaaggagacaatgactggagatgaattccgagctctcctgtccgagtttgttgaaatt 2025
||||| |||||| ||| ||||||||||||||| ||| | || || || |||||||||||
Sbjct: 298 gagaaagagacattgagtggagatgaattccgcgctatactctctgaatttgttgaaatc 357
Query: 2026 ccagctgaaaatcgggtccctcctt 2050
|||| ||||||||||| |||||||
Sbjct: 358 ccagtagaaaatcgggttcctcctt 382
>gnl|LJGI|AV779762 similar to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 460
Score = 111 bits (56), Expect = 2e-23
Identities = 156/188 (82%), Gaps = 1/188 (0%)
Strand = Plus / Minus
Query: 1810 atcatgagaatgatggcaagaaactcgatgtcagaaaggcttgccgaagacattgatgct 1869
|||||||||||||||||||| |||||||||| | || |||||| |||||| ||||| ||
Sbjct: 417 atcatgagaatgatggcaagggactcgatgtccgcaaagcttgcagaagaccttgattct 358
Query: 1870 gctgtcaagaggatctcagatgaagcgtatgaaatcgcactgaagcatataaggaacaac 1929
||| | |||||||||||||||| || |||| |||||||||| ||||||||| | ||
Sbjct: 357 gcttcccagaggatctcagatgatgcatatgtaatcgcactgcgccatataagg-tccac 299
Query: 1930 cgtgaagccatggataagattgtggaggtcttactggagaaggagacaatgactggagat 1989
|| || |||| || |||||||||| ||| | |||||||| |||||| |||||||||||
Sbjct: 298 cgcgaggccagtgaccagattgtggaagtccttctggagaaagagacattgactggagat 239
Query: 1990 gaattccg 1997
| ||||||
Sbjct: 238 ggattccg 231