Miyakogusa Predicted Gene

Lj6g3v1368660.3
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1368660.3 tr|G7IG65|G7IG65_MEDTR PAS protein ZEITLUPE
OS=Medicago truncatula GN=MTR_2g036510 PE=4 SV=1,92.32,0,Kelch_4,NULL;
Kelch_3,NULL; PAS_9,NULL; F-box-like,NULL; seg,NULL; PAS,PAS domain;
ADAGIO F-BOX PROT,CUFF.59981.3
         (1836 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS321080 similar to UniRef100_Q2PQA6 Cluster: ZTL; n=1;...  1098   0.0  
gnl|LJGI|TC82004 similar to UniRef100_A7Q6D0 Cluster: Chromosome...   963   0.0  
gnl|LJGI|FS351346 homologue to UniRef100_A2Q1M2 Cluster: Speract...   406   e-112
gnl|LJGI|TC68802 UniRef100_A7Q6D0 Cluster: Chromosome chr11 scaf...   149   7e-35
gnl|LJGI|TC59193 similar to UniRef100_A7P3V7 Cluster: Chromosome...    62   1e-08

>gnl|LJGI|FS321080 similar to UniRef100_Q2PQA6 Cluster: ZTL; n=1; Ipomoea nil|Rep: ZTL
           - Ipomoea nil (Japanese morning glory) (Pharbitis nil),
           partial (26%)
          Length = 759

 Score = 1098 bits (554), Expect = 0.0
 Identities = 554/554 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtgggacagcaattccgattacagcggcgacgacgacgacgcctcctcctctttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atggagtgggacagcaattccgattacagcggcgacgacgacgacgcctcctcctctttc 265

                                                                       
Query: 61  ctcctaaacgacgacgtcggacccatccctttccctgtcctccaaaccgcgccctgcgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctcctaaacgacgacgtcggacccatccctttccctgtcctccaaaccgcgccctgcgga 325

                                                                       
Query: 121 ttcgtcgtcaccgacgctcttgagcatgaccatcctatcatctacgtcaacgccgttttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttcgtcgtcaccgacgctcttgagcatgaccatcctatcatctacgtcaacgccgttttc 385

                                                                       
Query: 181 gagatgctcactggctaccgcgccgaagaagtgctcggtcgcaactgccgtttcttgcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gagatgctcactggctaccgcgccgaagaagtgctcggtcgcaactgccgtttcttgcag 445

                                                                       
Query: 241 tgtcgaggtccgtttgctaagagaaggcatccattggtggactcaacagtagtttcagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgtcgaggtccgtttgctaagagaaggcatccattggtggactcaacagtagtttcagaa 505

                                                                       
Query: 301 attagaagatgtcttgaggaaggggttgaattccaaggtgagttgctgaactttaggaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 attagaagatgtcttgaggaaggggttgaattccaaggtgagttgctgaactttaggaaa 565

                                                                       
Query: 361 gatgggactccacttatgaacagattgaggctgacacctatatatggagatgatgatgag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gatgggactccacttatgaacagattgaggctgacacctatatatggagatgatgatgag 625

                                                                       
Query: 421 ataattcatgtcattggaatccagctcttcacagaggccaacattgatcttggtcctgtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ataattcatgtcattggaatccagctcttcacagaggccaacattgatcttggtcctgtt 685

                                                                       
Query: 481 ccgggttctacaataaaggaatctgttaaatcatcagatgggtttcattctttcctgtcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ccgggttctacaataaaggaatctgttaaatcatcagatgggtttcattctttcctgtcc 745

                         
Query: 541 acattgcatcctct 554
           ||||||||||||||
Sbjct: 746 acattgcatcctct 759


>gnl|LJGI|TC82004 similar to UniRef100_A7Q6D0 Cluster: Chromosome chr11 scaffold_56,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_56, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (23%)
          Length = 728

 Score =  963 bits (486), Expect = 0.0
 Identities = 486/486 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtgggacagcaattccgattacagcggcgacgacgacgacgcctcctcctctttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atggagtgggacagcaattccgattacagcggcgacgacgacgacgcctcctcctctttc 302

                                                                       
Query: 61  ctcctaaacgacgacgtcggacccatccctttccctgtcctccaaaccgcgccctgcgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctcctaaacgacgacgtcggacccatccctttccctgtcctccaaaccgcgccctgcgga 362

                                                                       
Query: 121 ttcgtcgtcaccgacgctcttgagcatgaccatcctatcatctacgtcaacgccgttttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttcgtcgtcaccgacgctcttgagcatgaccatcctatcatctacgtcaacgccgttttc 422

                                                                       
Query: 181 gagatgctcactggctaccgcgccgaagaagtgctcggtcgcaactgccgtttcttgcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gagatgctcactggctaccgcgccgaagaagtgctcggtcgcaactgccgtttcttgcag 482

                                                                       
Query: 241 tgtcgaggtccgtttgctaagagaaggcatccattggtggactcaacagtagtttcagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tgtcgaggtccgtttgctaagagaaggcatccattggtggactcaacagtagtttcagaa 542

                                                                       
Query: 301 attagaagatgtcttgaggaaggggttgaattccaaggtgagttgctgaactttaggaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 attagaagatgtcttgaggaaggggttgaattccaaggtgagttgctgaactttaggaaa 602

                                                                       
Query: 361 gatgggactccacttatgaacagattgaggctgacacctatatatggagatgatgatgag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gatgggactccacttatgaacagattgaggctgacacctatatatggagatgatgatgag 662

                                                                       
Query: 421 ataattcatgtcattggaatccagctcttcacagaggccaacattgatcttggtcctgtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ataattcatgtcattggaatccagctcttcacagaggccaacattgatcttggtcctgtt 722

                 
Query: 481 ccgggt 486
           ||||||
Sbjct: 723 ccgggt 728


>gnl|LJGI|FS351346 homologue to UniRef100_A2Q1M2 Cluster: Speract/scavenger receptor;
            Cyclin-like F-box; Galactose oxidase, central; n=1;
            Medicago truncatula|Rep: Speract/scavenger receptor;
            Cyclin-like F-box; Galactose oxidase, central - Medicago
            truncatula (Barrel medic), partial (12%)
          Length = 665

 Score =  406 bits (205), Expect = e-112
 Identities = 205/205 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1632 ctcccagctattcatacttgatccaactgatgagaagcctacatggagaatcctaaatgt 1691
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665  ctcccagctattcatacttgatccaactgatgagaagcctacatggagaatcctaaatgt 606

                                                                        
Query: 1692 acctgggcgccctccacgatttgcttggggacatagtacatgcgtcgttggagggacaag 1751
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605  acctgggcgccctccacgatttgcttggggacatagtacatgcgtcgttggagggacaag 546

                                                                        
Query: 1752 agctattgttctgggtggtcaaactggggaggaatggatgctaagtgagctccatgaact 1811
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545  agctattgttctgggtggtcaaactggggaggaatggatgctaagtgagctccatgaact 486

                                     
Query: 1812 ttccctggcaagttctgccatctag 1836
            |||||||||||||||||||||||||
Sbjct: 485  ttccctggcaagttctgccatctag 461


>gnl|LJGI|TC68802 UniRef100_A7Q6D0 Cluster: Chromosome chr11 scaffold_56, whole genome
            shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
            chr11 scaffold_56, whole genome shotgun sequence - Vitis
            vinifera (Grape), partial (4%)
          Length = 712

 Score =  149 bits (75), Expect = 7e-35
 Identities = 75/75 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1762 ctgggtggtcaaactggggaggaatggatgctaagtgagctccatgaactttccctggca 1821
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9    ctgggtggtcaaactggggaggaatggatgctaagtgagctccatgaactttccctggca 68

                           
Query: 1822 agttctgccatctag 1836
            |||||||||||||||
Sbjct: 69   agttctgccatctag 83


>gnl|LJGI|TC59193 similar to UniRef100_A7P3V7 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (67%)
          Length = 1524

 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 301 attagaagatgtcttgaggaaggggttgaattccaaggtgagttgctgaactttaggaaa 360
           |||||||||||||||||||||||  |||| |||||||||||  | ||||| || ||||| 
Sbjct: 470 attagaagatgtcttgaggaaggtattgagttccaaggtgaacttctgaatttcaggaag 529

                      
Query: 361 gatgggactcc 371
           ||||| |||||
Sbjct: 530 gatggtactcc 540