Miyakogusa Predicted Gene

Lj6g3v1358590.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1358590.1 Non Chatacterized Hit- tr|D7L1Z2|D7L1Z2_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,40.12,3e-18,seg,NULL,CUFF.59390.1
         (549 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO023777                                                     601   e-171

>gnl|LJGI|GO023777 
          Length = 485

 Score =  601 bits (303), Expect = e-171
 Identities = 313/315 (99%), Gaps = 1/315 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagggtcaaccagccaaacgtagacgcgtttactcagttgaaccaaacaaagtagta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 atggagggtcaaccagccaaacgtagacgcgtttactcagttgaaccaaacaaagtagta 231

                                                                       
Query: 61  gaagcagcatttgctagaaactacatgaactatttagttccagctttgatgaagatcaag 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 232 gaagcagcatttgctagaaactacatgaactatttagttccagccttgatgaagatcaag 291

                                                                       
Query: 121 gaaattaatacttgtggtggtgatattcagaatgttgtcaagcatgaagtggacatggca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gaaattaatacttgtggtggtgatattcagaatgttgtcaagcatgaagtggacatggca 351

                                                                       
Query: 181 atggtgtcctcagcccaaggctttgcatggagtaattctctcaaactcaagcttcaaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 atggtgtcctcagcccaaggctttgcatggagtaattctctcaaactcaagcttcaaaat 411

                                                                       
Query: 241 caaagggaggatattggagtcagtgtaaatggaaacactagtatccctcaaagccctagt 300
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 412 caaagggaggatattggagtcagtgtaaatgg-aacactagtatccctcaaagccctagt 470

                          
Query: 301 tcagagtcacaggct 315
           |||||||||||||||
Sbjct: 471 tcagagtcacaggct 485