Miyakogusa Predicted Gene
- Lj6g3v1356520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1356520.1 tr|G7IN26|G7IN26_MEDTR Pumilio-like protein
OS=Medicago truncatula GN=MTR_2g036900 PE=4 SV=1,79.72,0,PUF,Pumilio
RNA-binding repeat; PUMILIO 1, 2,NULL; RNA BINDING PROTEIN
PUMILIO-RELATED,NULL; Pumilio,CUFF.59391.1
(2934 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80709 weakly similar to UniRef100_A7Q4A4 Cluster: Chr... 888 0.0
gnl|LJGI|AU252193 similar to UniRef100_A7QQT8 Cluster: Chromosom... 674 0.0
gnl|LJGI|TC69724 similar to UniRef100_A7QQT8 Cluster: Chromosome... 624 e-178
gnl|LJGI|FS320563 weakly similar to UniRef100_A7Q4A4 Cluster: Ch... 396 e-109
gnl|LJGI|AV410304 125 2e-27
gnl|LJGI|TC70599 weakly similar to UniRef100_A7Q4A4 Cluster: Chr... 105 2e-21
gnl|LJGI|TC75214 similar to UniRef100_A7QQT8 Cluster: Chromosome... 101 2e-20
gnl|LJGI|TC76971 similar to UniRef100_A7QQT8 Cluster: Chromosome... 70 9e-11
>gnl|LJGI|TC80709 weakly similar to UniRef100_A7Q4A4 Cluster: Chromosome chr9
scaffold_49, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_49, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (36%)
Length = 634
Score = 888 bits (448), Expect = 0.0
Identities = 448/448 (100%)
Strand = Plus / Plus
Query: 1 atggcaactgaaagtccaattagaatctcagaagctgggggtaagtggccgtctcataag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 atggcaactgaaagtccaattagaatctcagaagctgggggtaagtggccgtctcataag 246
Query: 61 gaagctgcaacttttggtcaaccatctcataacatggtgactgaggatttgggtatactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gaagctgcaacttttggtcaaccatctcataacatggtgactgaggatttgggtatactt 306
Query: 121 ttgaagggccataggttccatggcaggggacacgatgttgcacccaatcgcagtggcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttgaagggccataggttccatggcaggggacacgatgttgcacccaatcgcagtggcagt 366
Query: 181 gcacctcccagcatggaaggttcatttctggccatagaaaacctattacaccagcaaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gcacctcccagcatggaaggttcatttctggccatagaaaacctattacaccagcaaaac 426
Query: 241 accaccgagaatacaagtttgacaacgctaagcagagctgtgcaaaattgtgagtctgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 accaccgagaatacaagtttgacaacgctaagcagagctgtgcaaaattgtgagtctgaa 486
Query: 301 gaacaattacgagccagtccagcttatttggcatattacagttccaatgtcaacctaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gaacaattacgagccagtccagcttatttggcatattacagttccaatgtcaacctaaac 546
Query: 361 cctagacttcctcccccgcttacatcctgggaaaatcgccatctagggcatcatattggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 cctagacttcctcccccgcttacatcctgggaaaatcgccatctagggcatcatattggt 606
Query: 421 agttttagagataatgggaggttttctt 448
||||||||||||||||||||||||||||
Sbjct: 607 agttttagagataatgggaggttttctt 634
>gnl|LJGI|AU252193 similar to UniRef100_A7QQT8 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(13%)
Length = 350
Score = 674 bits (340), Expect = 0.0
Identities = 347/350 (99%)
Strand = Plus / Plus
Query: 1615 cttgatcaaagaactggtgctaatattaactcaagaaaaggtggatcattgactcctagt 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgatcaaagaactggtgctaatattaactcaagaaaaggtggatcattgactcctagt 60
Query: 1675 tattttgggcatatgccaaacatgggttttgtaatgcagtatccaaattccccacttcct 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tattttgggcatatgccaaacatgggttttgtaatgcagtatccaaattccccacttcct 120
Query: 1735 agtccagctttctcgggatatccagaaggaactcttggccttccaggaggtagaaatgaa 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtccagctttctcgggatatccagaaggaactcttggccttccaggaggtagaaatgaa 180
Query: 1795 atgaaactttccccagcttctggtagaaatggaggcatattatctggatggcaaggtcag 1854
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 atgaaactttccccagcttctggtanaaatggaggcatattatctggatggcaaggtcag 240
Query: 1855 aggtcctttgacagtgctcatgaccccaaaattgttaattttcttgaagagttaaaatct 1914
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 aggtcctttgacagtgctcatgaccccaaaattgttaattttcttgaanagttaaaatct 300
Query: 1915 ggcaaaggtcgtagatttgagctatctgatattattggacatattgttga 1964
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggcaaaggtcgtacatttgagctatctgatattattggacatattgttga 350
>gnl|LJGI|TC69724 similar to UniRef100_A7QQT8 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(23%)
Length = 773
Score = 624 bits (315), Expect = e-178
Identities = 315/315 (100%)
Strand = Plus / Plus
Query: 2620 agccagcataagtttgcttcgaatgttgtcgagaagtgcttggtgtatggtgatgtccca 2679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agccagcataagtttgcttcgaatgttgtcgagaagtgcttggtgtatggtgatgtccca 61
Query: 2680 gagcgggaatcgttgattgcagagattattggacaggatgagcaaaataataatttattg 2739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gagcgggaatcgttgattgcagagattattggacaggatgagcaaaataataatttattg 121
Query: 2740 acaatgatgaaagaccaatttgcgaactatgtggtccagaaagttattgatctctgttca 2799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 acaatgatgaaagaccaatttgcgaactatgtggtccagaaagttattgatctctgttca 181
Query: 2800 gaaaatcaacgagcaacgttgctttctcacataagagttcatgctcaggctttgaagaaa 2859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaaaatcaacgagcaacgttgctttctcacataagagttcatgctcaggctttgaagaaa 241
Query: 2860 tacacttatggaaaacacatcgtggctcggttggaacagcaatttgaagaggatcaatca 2919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tacacttatggaaaacacatcgtggctcggttggaacagcaatttgaagaggatcaatca 301
Query: 2920 cccagttcatgatga 2934
|||||||||||||||
Sbjct: 302 cccagttcatgatga 316
>gnl|LJGI|FS320563 weakly similar to UniRef100_A7Q4A4 Cluster: Chromosome chr9
scaffold_49, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_49, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 358
Score = 396 bits (200), Expect = e-109
Identities = 206/208 (99%)
Strand = Plus / Plus
Query: 1 atggcaactgaaagtccaattagaatctcagaagctgggggtaagtggccgtctcataag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 atggcaactgaaagtccaattagaatctcagaagctgggggtaagtggccgtctcataag 210
Query: 61 gaagctgcaacttttggtcaaccatctcataacatggtgactgaggatttgggtatactt 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 211 gaagctgcaacttttggtcaaccatctcataacatgaggactgaggatttgggtatactt 270
Query: 121 ttgaagggccataggttccatggcaggggacacgatgttgcacccaatcgcagtggcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttgaagggccataggttccatggcaggggacacgatgttgcacccaatcgcagtggcagt 330
Query: 181 gcacctcccagcatggaaggttcatttc 208
||||||||||||||||||||||||||||
Sbjct: 331 gcacctcccagcatggaaggttcatttc 358
>gnl|LJGI|AV410304
Length = 387
Score = 125 bits (63), Expect = 2e-27
Identities = 126/147 (85%)
Strand = Plus / Plus
Query: 1366 ggaagcatttcacatggagctgaaatggtacatgcaaacaagtaccttgggcaatttgga 1425
|||| |||||||||||||||||||||| ||| ||||| ||||| || || |||| ||||
Sbjct: 5 ggaaacatttcacatggagctgaaatgttacctgcaagcaagttactaggacaatatgga 64
Query: 1426 tatcctatgcagccttcttttggtgatccttattacatgcagtatcatcagcaaccttta 1485
| |||| |||||||||||||||||||| || |||||||| ||||| |||||||||||
Sbjct: 65 tttcctctgcagccttcttttggtgattctatgtacatgcaatatcaccagcaacctttt 124
Query: 1486 atggagggatatggtatttctggtcat 1512
||||||||||||| |||||||||||
Sbjct: 125 gcggagggatatggtgtttctggtcat 151
>gnl|LJGI|TC70599 weakly similar to UniRef100_A7Q4A4 Cluster: Chromosome chr9
scaffold_49, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_49, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (25%)
Length = 593
Score = 105 bits (53), Expect = 2e-21
Identities = 173/213 (81%)
Strand = Plus / Plus
Query: 1 atggcaactgaaagtccaattagaatctcagaagctgggggtaagtggccgtctcataag 60
||||| ||||| ||||| ||||||||||| ||||| ||||| || ||||| ||| ||||
Sbjct: 173 atggcgactgagagtccgattagaatctcggaagccggggggaaatggccaactcttaag 232
Query: 61 gaagctgcaacttttggtcaaccatctcataacatggtgactgaggatttgggtatactt 120
|||||||| ||||| ||| ||| |||| |||| ||| ||| |||||||||| | | |||
Sbjct: 233 gaagctgcgactttcggttcaccgtctcgtaacgtggcgacggaggatttggctgttctt 292
Query: 121 ttgaagggccataggttccatggcaggggacacgatgttgcacccaatcgcagtggcagt 180
|||||| |||||||||| ||||| ||| |||| | ||||||||||| || |||
Sbjct: 293 ttgaagagccataggttttgtggcaatggaagggatgcggtgcccaatcgcagcggtagt 352
Query: 181 gcacctcccagcatggaaggttcatttctggcc 213
|||||||| ||||||||||| |||||| |||||
Sbjct: 353 gcacctccgagcatggaagggtcatttatggcc 385
>gnl|LJGI|TC75214 similar to UniRef100_A7QQT8 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(8%)
Length = 559
Score = 101 bits (51), Expect = 2e-20
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 2817 gttgctttctcacataagagttcatgctcaggctttgaagaaatacacttatggaaaaca 2876
||||||||||| |||||||| ||| |||| |||||||||||||||||||| ||||||||
Sbjct: 14 gttgctttctcgcataagagctcaccctcatgctttgaagaaatacacttacggaaaaca 73
Query: 2877 catcgtggctcggttggaacagc 2899
||| ||||||||||| |||||||
Sbjct: 74 cattgtggctcggttcgaacagc 96
>gnl|LJGI|TC76971 similar to UniRef100_A7QQT8 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(7%)
Length = 693
Score = 69.9 bits (35), Expect = 9e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 2817 gttgctttctcacataagagttcatgctcaggctttgaagaaatacacttatggaaaaca 2876
|||||||| || |||||||| ||| |||| ||||||||||||||||||| || |||||
Sbjct: 38 gttgctttttcgcataagagctcacactcatgctttgaagaaatacactttcgggaaaca 97
Query: 2877 catcgtggctcggttggaacagc 2899
| | ||||||||||| |||||||
Sbjct: 98 ccttgtggctcggttcgaacagc 120