Miyakogusa Predicted Gene

Lj6g3v1334380.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1334380.1 tr|Q5Z846|Q5Z846_ORYSJ Os06g0700300 protein
OS=Oryza sativa subsp. japonica GN=P0468G03.21 PE=2
SV=1,42.86,0.000000000000006,DUF4228,Protein of unknown function
DUF4228; seg,NULL,CUFF.59373.1
         (573 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70612                                                     1136   0.0  

>gnl|LJGI|TC70612 
          Length = 1379

 Score = 1136 bits (573), Expect = 0.0
 Identities = 573/573 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggagggtgtttttcttgtagatcatcctccaagaactccaaatcaaacagtgttaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 atgggagggtgtttttcttgtagatcatcctccaagaactccaaatcaaacagtgttaga 471

                                                                       
Query: 61  ctagttcatctcagtggctatgtagaggattttgagcaaccaatttcagtgagtcaagtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ctagttcatctcagtggctatgtagaggattttgagcaaccaatttcagtgagtcaagtc 531

                                                                       
Query: 121 actggaaacagtggaaaccccacaagtcattttgtttgcacttctgttcagcttctttcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 actggaaacagtggaaaccccacaagtcattttgtttgcacttctgttcagcttctttcc 591

                                                                       
Query: 181 tcttgctcaaaatcacttaagggagacacacaactccaaccagggaatgtgtacttcatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tcttgctcaaaatcacttaagggagacacacaactccaaccagggaatgtgtacttcatg 651

                                                                       
Query: 241 cttccatactcaattcttcaacctgatgtttctcctgtggatttggcttcccttgcaaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 cttccatactcaattcttcaacctgatgtttctcctgtggatttggcttcccttgcaaag 711

                                                                       
Query: 301 aggctcacatcaatagccaaaacaagaagaagatcatgtgatgaggacaaaaagtccttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aggctcacatcaatagccaaaacaagaagaagatcatgtgatgaggacaaaaagtccttg 771

                                                                       
Query: 361 aaggctagtcctttggctagtcaaattgggttgagcaatgtttggagttcaccttctagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 aaggctagtcctttggctagtcaaattgggttgagcaatgtttggagttcaccttctagg 831

                                                                       
Query: 421 agccctggcagagttggtgtggctgaggaaattggactggcttatggaggaagaagtgtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 agccctggcagagttggtgtggctgaggaaattggactggcttatggaggaagaagtgtt 891

                                                                       
Query: 481 tctggagtgaggccatggaaacctatcttgggcactattagggagaagtcactcaatagg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 tctggagtgaggccatggaaacctatcttgggcactattagggagaagtcactcaatagg 951

                                            
Query: 541 agaagtgagtcagatttgctagaaaatcgttga 573
           |||||||||||||||||||||||||||||||||
Sbjct: 952 agaagtgagtcagatttgctagaaaatcgttga 984