Miyakogusa Predicted Gene
- Lj6g3v1334370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1334370.1 tr|Q2HUM2|Q2HUM2_MEDTR Oxysterol-binding protein
OS=Medicago truncatula GN=MtrDRAFT_AC149130g35v2
PE,79.43,0,coiled-coil,NULL; OXYSTEROL-BINDING
PROTEIN-RELATED,Oxysterol-binding protein; Oxysterol-binding
pro,CUFF.59369.1
(1164 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC594413 similar to UniRef100_Q2HUM2 Cluster: Oxysterol... 928 0.0
gnl|LJGI|TC80015 similar to UniRef100_Q2HUM2 Cluster: Oxysterol-... 234 1e-60
gnl|LJGI|GO041484 similar to UniRef100_A2Q1Y1 Cluster: Oxysterol... 94 2e-18
gnl|LJGI|AV424418 similar to UniRef100_A2Q1Y1 Cluster: Oxysterol... 68 1e-10
>gnl|LJGI|DC594413 similar to UniRef100_Q2HUM2 Cluster: Oxysterol-binding protein;
n=1; Medicago truncatula|Rep: Oxysterol-binding protein
- Medicago truncatula (Barrel medic), partial (40%)
Length = 595
Score = 928 bits (468), Expect = 0.0
Identities = 470/471 (99%)
Strand = Plus / Plus
Query: 168 gctgccaccattgttcaacttaccaaagtcacaacttcagtgctatggtgaatcagtgta 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gctgccaccattgttcaacttaccaaagtcacaacttcagtgctatggtgaatcagtgta 184
Query: 228 ttgcgcggcttcggacatgctaagtgtgtgcaacagagggcagagtccattggataggtt 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ttgcgcggcttcggacatgctaagtgtgtgcaacagagggcagagtccattggataggtt 244
Query: 288 catatcagtggtggcatggtgcatatccaccacacgccctgcaacttttggggctgctcc 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 catatcagtggtggcatggtgcatatccaccacacgccctgcaacttttggggctgctcc 304
Query: 348 ttataatcccattcttggtgagacacatcatgtttccaaaggaaatcttaatgtgttact 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttataatcccattcttggtgagacacatcatgtttccaaaggaaatcttaatgtgttact 364
Query: 408 tgaacaggtttcccatcaccctccagtaactgccctgcatgcaacagatgagaaggagaa 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgaacaggtttcccatcaccctccagtaactgccctgcatgcaacagatgagaaggagaa 424
Query: 468 catagaaatgctatggtgtcagcaacctgttccaaagttttatggcacatcagttgaagc 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 catagaaatgctatggtgtcagcaacctgttccaaagttttatggcacatcagttgaagc 484
Query: 528 tcaagtgcatggtatacgtcggttgaagctcctaaatcatggcgaaacatatgaaatgaa 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcaagtgcatggtatacgtcggttgaagctcctaaatcatggcgaaacatatgaaatgaa 544
Query: 588 ttgtcctcaccttctgtttagaattcttccagttcctggggctgattgggt 638
|||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 545 ttgtcctcaccttctgtttagaattcttccagttcctgnggctgattgggt 595
>gnl|LJGI|TC80015 similar to UniRef100_Q2HUM2 Cluster: Oxysterol-binding protein;
n=1; Medicago truncatula|Rep: Oxysterol-binding protein
- Medicago truncatula (Barrel medic), partial (68%)
Length = 879
Score = 234 bits (118), Expect = 1e-60
Identities = 307/370 (82%)
Strand = Plus / Plus
Query: 274 ccattggataggttcatatcagtggtggcatggtgcatatccaccacacgccctgcaact 333
||||||||||| ||||||||||| || |||||| |||| |||||||||||||| |||
Sbjct: 336 ccattggatagattcatatcagttgtagcatggagcatttccaccacacgcccaacaaag 395
Query: 334 tttggggctgctccttataatcccattcttggtgagacacatcatgtttccaaaggaaat 393
|| || |||||||| |||||||| ||||| |||||||| || ||||||||||| |||||
Sbjct: 396 ttcggagctgctccctataatccaattctcggtgagactcaccatgtttccaagggaaac 455
Query: 394 cttaatgtgttacttgaacaggtttcccatcaccctccagtaactgccctgcatgcaaca 453
|||||||| ||||| ||||||||||| || |||||||||||| | ||||| ||||| ||
Sbjct: 456 cttaatgtcttactagaacaggtttctcaccaccctccagtatcagccctccatgccact 515
Query: 454 gatgagaaggagaacatagaaatgctatggtgtcagcaacctgttccaaagttttatggc 513
||| | ||||| ||||||||||| ||||||||||| ||||||||||||||| |||
Sbjct: 516 gatcaaaaggaaaacatagaaattatatggtgtcagatccctgttccaaagtttattggt 575
Query: 514 acatcagttgaagctcaagtgcatggtatacgtcggttgaagctcctaaatcatggcgaa 573
|| |||| |||||| | |||||||| | ||| | | ||||||||| |||||||| ||
Sbjct: 576 actgcagtagaagctaaggtgcatggcaaacgacagctgaagctccacaatcatggagag 635
Query: 574 acatatgaaatgaattgtcctcaccttctgtttagaattcttccagttcctggggctgat 633
|| |||||||||| || ||||| |||| || ||| ||||||||||||||||| |||||
Sbjct: 636 acgtatgaaatgagttcacctcatattctattcagatttcttccagttcctgggactgat 695
Query: 634 tgggttggca 643
||| ||||||
Sbjct: 696 tggtttggca 705
>gnl|LJGI|GO041484 similar to UniRef100_A2Q1Y1 Cluster: Oxysterol-binding protein;
n=1; Medicago truncatula|Rep: Oxysterol-binding protein
- Medicago truncatula (Barrel medic), partial (25%)
Length = 469
Score = 93.7 bits (47), Expect = 2e-18
Identities = 128/155 (82%)
Strand = Plus / Minus
Query: 844 agagtcatatatgatgcaaaggaagtcatgtcagggctccaagttcctattcttaaagat 903
||||| |||||||||||||| || || ||||| ||||||| |||| || |||| |||
Sbjct: 465 agagttatatatgatgcaaaaaaaactatttcaggcctccaagctccttttgttaaggat 406
Query: 904 gcagagagtgtgttgccaacagaatcagcccatgtttggagtgaattgagtgaagctatt 963
|||||| ||||| | ||||||||||||| | |||||||||||| ||||| |||| ||
Sbjct: 405 ccagagaatgtgtggacaacagaatcagctcttgtttggagtgagttgagccaagccatc 346
Query: 964 ctgagaaaagagtgggagaaagcaagagaagcaaa 998
||||| ||||| ||||| ||||||||||| |||||
Sbjct: 345 ctgagcaaagactgggaaaaagcaagagaggcaaa 311
>gnl|LJGI|AV424418 similar to UniRef100_A2Q1Y1 Cluster: Oxysterol-binding protein;
n=1; Medicago truncatula|Rep: Oxysterol-binding protein
- Medicago truncatula (Barrel medic), partial (22%)
Length = 303
Score = 67.9 bits (34), Expect = 1e-10
Identities = 103/126 (81%)
Strand = Plus / Plus
Query: 518 cagttgaagctcaagtgcatggtatacgtcggttgaagctcctaaatcatggcgaaacat 577
|||| |||||| | |||||||| | ||| | | ||||||||| |||||||| || || |
Sbjct: 76 cagtagaagctaaggtgcatggcaaacgacagctgaagctccacaatcatggagagacgt 135
Query: 578 atgaaatgaattgtcctcaccttctgtttagaattcttccagttcctggggctgattggg 637
||||||||| || ||||| |||| || ||| ||||||||||||||||| ||||||||
Sbjct: 136 atgaaatgagttcacctcatattctattcagatttcttccagttcctgggactgattggt 195
Query: 638 ttggca 643
||||||
Sbjct: 196 ttggca 201