Miyakogusa Predicted Gene
- Lj6g3v1333120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1333120.1 tr|G7IG77|G7IG77_MEDTR TBC1 domain family
member-like protein OS=Medicago truncatula
GN=MTR_2g037930,75.06,0,seg,NULL; TBC_RABGAP,Rab-GTPase-TBC domain;
MICROTUBULE-ASSOCIATED PROTEIN-RELATED,NULL; TBC1 DOMAIN,CUFF.59359.1
(2664 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71267 similar to UniRef100_A7QXM9 Cluster: Chromosome... 1403 0.0
gnl|LJGI|BP057230 similar to UniRef100_A7QXM9 Cluster: Chromosom... 1066 0.0
gnl|LJGI|TC70665 similar to UniRef100_A7QXM9 Cluster: Chromosome... 743 0.0
gnl|LJGI|TC77498 homologue to UniRef100_A9US77 Cluster: Predicte... 353 4e-96
gnl|LJGI|BP083815 similar to UniRef100_Q9XHE5 Cluster: Microtubu... 270 4e-71
gnl|LJGI|TC81007 homologue to UniRef100_A7QXM9 Cluster: Chromoso... 163 7e-39
gnl|LJGI|TC63322 similar to UniRef100_A7QXM9 Cluster: Chromosome... 113 6e-24
gnl|LJGI|FS320113 weakly similar to UniRef100_A7QXM9 Cluster: Ch... 76 1e-12
>gnl|LJGI|TC71267 similar to UniRef100_A7QXM9 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(9%)
Length = 945
Score = 1403 bits (708), Expect = 0.0
Identities = 723/728 (99%)
Strand = Plus / Plus
Query: 1937 caaatttatcccttggtgaatgcagtgaaacttcagataccagtcctaatgattcactgc 1996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 caaatttatcccttggtgaatgcagtgaaacttcagataccagtcctaatgattcactgc 61
Query: 1997 ttccaatctctcatcctcctgagagcatacctcaggcatcagggtgcaataatgacgatg 2056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttccaatctctcatcctcctgagagcatacctcaggcatcagggtgcaataatgacgatg 121
Query: 2057 caggaaatccaggatgccatgaaatttcagaagccagttccaataatgaggctacaaaat 2116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 caggaaatccaggatgccatgaaatttcagaagccagttccaataatgaggctacaaaat 181
Query: 2117 cagggtgcaataatgatgatgcaggaaatcctcaatgcaatgaaatttcagataatggtc 2176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cagggtgcaataatgatgatgcaggaaatcctcaatgcaatgaaatttcagataatggtc 241
Query: 2177 caaataattcaccatctccaatctctggtcctcctgagaacacacctcagacgtgcaata 2236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caaataattcaccatctccaatctctggtcctcctgagaacacacctcagacgtgcaata 301
Query: 2237 atgatgattcaggaaattcagtcacacatcctaaagagagaaaacaaaataaattccagt 2296
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 302 atgatgattcaggaaattcagtcacacatcctaaagagagaaaaccaaatcaattccagt 361
Query: 2297 ggctttggaagtttggacggaataatgctgacgttatctctgagaaagtaggaggtgctg 2356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ggctttggaagtttggacggaataatgctgacgttatctctgagaaagtaggaggtgctg 421
Query: 2357 ctgaggctacaaaacctaccaacagttctagcagccaaagtaatagacccgcgccggcct 2416
|||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 422 ctgaggctaccaaacctacccacagttctagcagcccaagtaatagacccgcgccggcct 481
Query: 2417 catctacatctaatggtcattgtagttctgttagctatggaggagaatctgtggaccaga 2476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 catctacatctaatggtcattgtagttctgttagctatggaggagaatctgtggaccaga 541
Query: 2477 atgtgatgggaactttgaagaatcttgggcagtctatgcttgaccatattcaggtgattg 2536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atgtgatgggaactttgaagaatcttgggcagtctatgcttgaccatattcaggtgattg 601
Query: 2537 aatctgttttccaacaagaccggggacagggagcctcaatggagaacttatctaagaatg 2596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aatctgttttccaacaagaccggggacagggagcctcaatggagaacttatctaagaatg 661
Query: 2597 ttcttgttggcaaaggccaggttactgccgtgacagctctcaaggagcttcggaaaatta 2656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ttcttgttggcaaaggccaggttactgccgtgacagctctcaaggagcttcggaaaatta 721
Query: 2657 gcaatctt 2664
||||||||
Sbjct: 722 gcaatctt 729
>gnl|LJGI|BP057230 similar to UniRef100_A7QXM9 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (23%)
Length = 541
Score = 1066 bits (538), Expect = 0.0
Identities = 540/541 (99%)
Strand = Plus / Minus
Query: 168 tgttcttcgtcgggtcactgctgattgtagaaggaggtatgctagtttgagaaggcgcct 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgttcttcgtcgggtcactgctgattgtagaaggaggtatgctagtttgagaaggcgcct 482
Query: 228 ccttgttgaaccacatgttcgaaaggatggaactaattcacctaatgctgtcgtggacaa 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccttgttgaaccacatgttcgaaaggatggaactaattcacctaatgctgtcgtggacaa 422
Query: 288 tccactttcacaaaatccagatagtacatggagtcgcttttttcgcaatgcagagctgga 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tccactttcacaaaatccagatagtacatggagtcgcttttttcgcaatgcagagctgga 362
Query: 348 gagaatggttgatcaggatttgtcacgcttatacccagaacatggcagttatttccagac 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagaatggttgatcaggatttgtcacgcttatacccagaacatggcagttatttccagac 302
Query: 408 accgggatgccaaggcatgttgagacgaattttattactatggtgtctcaggcacccaga 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 accgggatgccaaggcatgttgagacgaattttattactatggtgtctcaggcacccaga 242
Query: 468 atgtggttatagacaaggaatgcatgaattacttgctcctctgctttatgttctccaagt 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgtggttatagacaaggaatgcatgaattacttgctcctctgctttatgttctccaagt 182
Query: 528 tgatttggagcgtctttcagaagttcggaagctttatgaagatcaattcacagacagatt 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgatttggagcgtctttcagaagttcggaagctttatgaagatcaattcacagacagatt 122
Query: 588 tgatggccttctatgccaagagaatgatcttgcttacagtttcgattttatgaaatatcc 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatggccttctatgccaagagaatgatcttgcttacagtttcgattttatgaaatatcc 62
Query: 648 agaccaggtagagaatgaaattggctcctgtggaaatgcaatgaaagtcaatagtcttga 707
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 agaccaggtagagaatgaaattggctcctgtggaaatgcaatgaaagtcantagtcttga 2
Query: 708 t 708
|
Sbjct: 1 t 1
>gnl|LJGI|TC70665 similar to UniRef100_A7QXM9 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(11%)
Length = 586
Score = 743 bits (375), Expect = 0.0
Identities = 378/379 (99%)
Strand = Plus / Plus
Query: 2286 taaattccagtggctttggaagtttggacggaataatgctgacgttatctctgagaaagt 2345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaattccagtggctttggaagtttggacggaataatgctgacgttatctctgagaaagt 60
Query: 2346 aggaggtgctgctgaggctacaaaacctaccaacagttctagcagccaaagtaatagacc 2405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggaggtgctgctgaggctacaaaacctaccaacagttctagcagccaaagtaatagacc 120
Query: 2406 cgcgccggcctcatctacatctaatggtcattgtagttctgttagctatggaggagaatc 2465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgcgccggcctcatctacatctaatggtcattgtagttctgttagctatggaggagaatc 180
Query: 2466 tgtggaccagaatgtgatgggaactttgaagaatcttgggcagtctatgcttgaccatat 2525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtggaccagaatgtgatgggaactttgaagaatcttgggcagtctatgcttgaccatat 240
Query: 2526 tcaggtgattgaatctgttttccaacaagaccggggacagggagcctcaatggagaactt 2585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaggtgattgaatctgttttccaacaagaccggggacagggagcctcaatggagaactt 300
Query: 2586 atctaagaatgttcttgttggcaaaggccaggttactgccgtgacagctctcaaggagct 2645
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 301 atctaagaatgttcttgttggccaaggccaggttactgccgtgacagctctcaaggagct 360
Query: 2646 tcggaaaattagcaatctt 2664
|||||||||||||||||||
Sbjct: 361 tcggaaaattagcaatctt 379
>gnl|LJGI|TC77498 homologue to UniRef100_A9US77 Cluster: Predicted protein; n=1;
Monosiga brevicollis MX1|Rep: Predicted protein -
Monosiga brevicollis MX1, partial (9%)
Length = 567
Score = 353 bits (178), Expect = 4e-96
Identities = 195/198 (98%), Gaps = 2/198 (1%)
Strand = Plus / Plus
Query: 1 atggtcatgcctccttctctggtggatccattgttaccgtctccttcgagctctgactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atggtcatgcctccttctctggtggatccattgttaccgtctccttcgagctctgactct 429
Query: 61 gttcctccgagatcggcgccggagaatcggcgattcggtgatcttagaggc-ttgcagtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 430 gttcctccgagatcggcgccggagaatcggcgattcggtgatcttagaggctttgcagtg 489
Query: 120 gcgtataaatcttggggtgttgccgtc-tgcgtcttcagcttccattgatgttcttcgtc 178
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 490 gcgtataaatcttggggtgtggccgtcttgcgtcttcagcttccattgatgttcttcgtc 549
Query: 179 gggtcactgctgattgta 196
||||||||||||||||||
Sbjct: 550 gggtcactgctgattgta 567
>gnl|LJGI|BP083815 similar to UniRef100_Q9XHE5 Cluster: Microtubule-associated protein;
n=4; Arabidopsis thaliana|Rep: Microtubule-associated
protein - Arabidopsis thaliana (Mouse-ear cress), partial
(3%)
Length = 333
Score = 270 bits (136), Expect = 4e-71
Identities = 136/136 (100%)
Strand = Plus / Minus
Query: 2396 gtaatagacccgcgccggcctcatctacatctaatggtcattgtagttctgttagctatg 2455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gtaatagacccgcgccggcctcatctacatctaatggtcattgtagttctgttagctatg 274
Query: 2456 gaggagaatctgtggaccagaatgtgatgggaactttgaagaatcttgggcagtctatgc 2515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gaggagaatctgtggaccagaatgtgatgggaactttgaagaatcttgggcagtctatgc 214
Query: 2516 ttgaccatattcaggt 2531
||||||||||||||||
Sbjct: 213 ttgaccatattcaggt 198
>gnl|LJGI|TC81007 homologue to UniRef100_A7QXM9 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(4%)
Length = 329
Score = 163 bits (82), Expect = 7e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 2583 cttatctaagaatgttcttgttggcaaaggccaggttactgccgtgacagctctcaagga 2642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttatctaagaatgttcttgttggcaaaggccaggttactgccgtgacagctctcaagga 60
Query: 2643 gcttcggaaaattagcaatctt 2664
||||||||||||||||||||||
Sbjct: 61 gcttcggaaaattagcaatctt 82
>gnl|LJGI|TC63322 similar to UniRef100_A7QXM9 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(9%)
Length = 718
Score = 113 bits (57), Expect = 6e-24
Identities = 167/204 (81%), Gaps = 6/204 (2%)
Strand = Plus / Plus
Query: 2461 gaatctgtggaccagaatgtgatgggaactttgaagaatcttgggcagtctatgcttgac 2520
|||||||| |||||||||||||| | ||||| | |||||||||||| || ||||||||
Sbjct: 422 gaatctgtagaccagaatgtgattgacactttaaggaatcttgggcaatcaatgcttgaa 481
Query: 2521 catattcaggtgattgaatctgttttccaacaagaccggggacagggagcctcaatggag 2580
||||||||||||||||| ||| |||||||||| || |||||||| ||||||||
Sbjct: 482 catattcaggtgattgagtctactttccaacaa------ggccagggagcttcaatggat 535
Query: 2581 aacttatctaagaatgttcttgttggcaaaggccaggttactgccgtgacagctctcaag 2640
| | | ||||| |||||| | | ||||||||| |||||| | ||| | |||||||||||
Sbjct: 536 atcatgtctaaaaatgttgtgggtggcaaagggcaggttgcagccatatcagctctcaag 595
Query: 2641 gagcttcggaaaattagcaatctt 2664
|| || || |||||||||||||||
Sbjct: 596 gaactccgcaaaattagcaatctt 619
>gnl|LJGI|FS320113 weakly similar to UniRef100_A7QXM9 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 675
Score = 75.8 bits (38), Expect = 1e-12
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 78 gccggagaatcggcgattcggtgatcttagaggcttgcagtggcgtataaatcttggggt 137
||||||||||| | |||||| || |||||||| ||||||||||||||||||||||||||
Sbjct: 482 gccggagaatcaggaattcggggaccttagaggtttgcagtggcgtataaatcttggggt 541
Query: 138 gttgcc 143
|||||
Sbjct: 542 tttgcc 547
Score = 71.9 bits (36), Expect = 2e-11
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 151 tcttcagcttccattgatgttcttcgtcgggtcactgctgattgtagaaggaggtatgct 210
|||||||||| | |||||| ||||||||| | ||| ||| ||| | ||||||| |||||
Sbjct: 567 tcttcagcttactttgatgatcttcgtcgcgccaccgctaattctcgaaggagatatgcc 626
Query: 211 agtttgagaaggcgcctcct 230
||||||||||||||||||||
Sbjct: 627 agtttgagaaggcgcctcct 646