Miyakogusa Predicted Gene
- Lj6g3v1333010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1333010.1 Non Chatacterized Hit- tr|K3WGX2|K3WGX2_PYTUL
Uncharacterized protein OS=Pythium ultimum
GN=PYU1_G00,26.99,3e-17,PHD,Zinc finger, PHD-finger;
Homeobox,Homeodomain; ZF_PHD_1,Zinc finger, PHD-type, conserved site;
c,CUFF.59393.1
(2151 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV779956 similar to UniRef100_A7QXM2 Cluster: Chromosom... 694 0.0
gnl|LJGI|TC73263 similar to UniRef100_Q0DZS7 Cluster: Os02g06011... 92 2e-17
>gnl|LJGI|AV779956 similar to UniRef100_A7QXM2 Cluster: Chromosome undetermined
scaffold_226, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_226, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(4%)
Length = 372
Score = 694 bits (350), Expect = 0.0
Identities = 365/370 (98%)
Strand = Plus / Minus
Query: 1782 tggtaaaaatgtcactggcagagagaaaataaaatcatgtagcagtcctttgaagaaaag 1841
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 372 tggtaaaaatgtcactggcagagagaaaatgaaatcatgtagcagtcctttgaagaaaag 313
Query: 1842 acgactacaaatacctccacccttaagagaaaacggcaacaagggttccatggaggtcaa 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 acgactacaaatacctccacccttaagagaaaacggcaacaagggttccatggaggtcaa 253
Query: 1902 tgatgatgttagtttaaagaaactgttgaaagaaaagaaaacaagggtcaattttatatc 1961
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 252 tgatgatgttagtttaaagaaactgttgaaagaaaagaaaacaagggtcgattttatatc 193
Query: 1962 tgaaggagactctcaggcagcagaattggaattcgaaaggatcagcaaactgaaggctaa 2021
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 192 tgaaggagactctcaggcagcagaattggaattcgaaaggatcagccaactgaaggctaa 133
Query: 2022 actagatagtatgaagcaaaaattaactgaagttcaaaatctcagggcaagtggttcaga 2081
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 132 actagatagtatgaagccaaaattaactgaagttcaaaatctcagggccagtggttcaga 73
Query: 2082 taaactctgttcaaatgagccatctgttatatatgtacctatagctgagttaagggaaaa 2141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 taaactctgttcaaatgagccatctgttatatatgtacctatagctgagttaagggaaaa 13
Query: 2142 agtggaataa 2151
||||||||||
Sbjct: 12 agtggaataa 3
>gnl|LJGI|TC73263 similar to UniRef100_Q0DZS7 Cluster: Os02g0601100 protein; n=2; Oryza
sativa Japonica Group|Rep: Os02g0601100 protein - Oryza
sativa subsp. japonica (Rice), partial (47%)
Length = 1053
Score = 91.7 bits (46), Expect = 2e-17
Identities = 98/113 (86%), Gaps = 3/113 (2%)
Strand = Plus / Minus
Query: 1396 gaaagtgagaacaaaaatcccaataatgagaatagtgatggaataagagagggttcttca 1455
|||| ||||||||||||| | ||||||||||| | |||| |||||||||| ||| |||||
Sbjct: 572 gaaaatgagaacaaaaattcaaataatgagaacaatgatagaataagagaaggtacttca 513
Query: 1456 ggcaaac--caataagaaggtcttgtttcaggattccacatgatgcacttgag 1506
| || || || ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 512 gacataccacagtaagaaggtcttgtttcaggatt-cgcatgatgcacttgag 461
Score = 83.8 bits (42), Expect = 4e-15
Identities = 77/88 (87%), Gaps = 3/88 (3%)
Strand = Plus / Minus
Query: 1273 gaaatgtttgggaaggatgctcctccatgtgaa---ctagtgagtgaagatgaagactgg 1329
|||||||||| |||||||||||||||||||||| |||||||||| |||| |||||| |
Sbjct: 668 gaaatgtttgagaaggatgctcctccatgtgaattcctagtgagtggagattaagactag 609
Query: 1330 ggtactggcaaaagaaagcgaagagaaa 1357
||| ||| ||||||||||||| |||||
Sbjct: 608 ggtcctgcaaaaagaaagcgaaaagaaa 581