Miyakogusa Predicted Gene
- Lj6g3v1331890.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1331890.3 Non Chatacterized Hit- tr|I1JRP0|I1JRP0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57407
PE,46.15,3e-19,KH_1,K Homology domain, type 1; Eukaryotic type
KH-domain (KH-domain type I),NULL; no description,NU,CUFF.59361.3
(537 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57429 similar to UniRef100_A7QUD9 Cluster: Chromosome... 1057 0.0
gnl|LJGI|TC70493 similar to UniRef100_A7QUD9 Cluster: Chromosome... 192 2e-48
gnl|LJGI|TC72222 similar to UniRef100_A7QUD9 Cluster: Chromosome... 109 2e-23
>gnl|LJGI|TC57429 similar to UniRef100_A7QUD9 Cluster: Chromosome chr11 scaffold_177,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_177, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 1840
Score = 1057 bits (533), Expect = 0.0
Identities = 536/537 (99%)
Strand = Plus / Plus
Query: 1 atgccgccttcagcaaaaagggattctgtctttgtggaccgtgaaagtcaattggactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 atgccgccttcagcaaaaagggattctgtctttgtggaccgtgaaagtcaattggactct 975
Query: 61 ttacttccttcctccactatgtctctctatggccaagatgcttcacattctaatattcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 ttacttccttcctccactatgtctctctatggccaagatgcttcacattctaatattcgt 1035
Query: 121 tcttcagctcttagtcgtgttggtgctcccattgttactacggtaatacaaacaatgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 tcttcagctcttagtcgtgttggtgctcccattgttactacggtaatacaaacaatgcaa 1095
Query: 181 attccactatcctatgcagaggatatcattggtattcaagggaaaaatattgattacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1096 attccactatcctatgcagaggatatcattggtattcaagggaaaaatattgattacatt 1155
Query: 241 cgccgcgctagtggagccatattgattgtgcaggagagcagggtgcctgatgaaatcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1156 cgccgcgctagtggagccatattgattgtgcaggagagcagggtgcctgatgaaatcatt 1215
Query: 301 gtggaaataaaaggcacctcgtctcaggttcaactggcacaagaactgattcaggatatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1216 gtggaaataaaaggcacctcgtctcaggttcaactggcacaagaactgattcaggatatt 1275
Query: 361 ataaacagtcacagagaacctgttgctagcagttatggcaggttagatgcagatctgagg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1276 ataaacagtcacagagaacctgttgctagcagttatggcaggttagatgcaggtctgagg 1335
Query: 421 tcttcatattctcagatgagcactgcgccccgcttctcatcttcgatgtcctcacaacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1336 tcttcatattctcagatgagcactgcgccccgcttctcatcttcgatgtcctcacaacca 1395
Query: 481 tacaacacaggttatggagcatccggtttaggggactacagtactttcagactttaa 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1396 tacaacacaggttatggagcatccggtttaggggactacagtactttcagactttaa 1452
>gnl|LJGI|TC70493 similar to UniRef100_A7QUD9 Cluster: Chromosome chr11 scaffold_177,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_177, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 705
Score = 192 bits (97), Expect = 2e-48
Identities = 203/237 (85%), Gaps = 1/237 (0%)
Strand = Plus / Plus
Query: 199 gaggatatcattggtattcaagggaaaaatattgattacattcgccgcgcta-gtggagc 257
||||| || |||||||| |||||| |||||||| |||| ||||||| ||| |||||||
Sbjct: 56 gaggacataattggtatgcaagggtcaaatattgcttaccttcgccgtactatgtggagc 115
Query: 258 catattgattgtgcaggagagcagggtgcctgatgaaatcattgtggaaataaaaggcac 317
|||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 116 catattgactgtgcaagagagccgggtgcctgatgaaatcattgtggaaataaaaggcac 175
Query: 318 ctcgtctcaggttcaactggcacaagaactgattcaggatattataaacagtcacagaga 377
||| || ||||||||| | |||||| || ||||||||||| |||||| | |||| ||
Sbjct: 176 ctcatcacaggttcaaatagcacaacaattgattcaggatgttataacccatcaccagga 235
Query: 378 acctgttgctagcagttatggcaggttagatgcagatctgaggtcttcatattctca 434
|||||| ||||| ||||| ||||||||||||||| |||||| ||||| || |||||
Sbjct: 236 acctgtcgctagtagttacagcaggttagatgcaggtctgagatcttcttactctca 292
Score = 52.0 bits (26), Expect = 4e-06
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 161 cggtaatacaaac-aatgcaaattccactatcctatgcagag 201
||||||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 42 cggtaatacaaactaatgcaaataccactgtcctatgcagag 1
>gnl|LJGI|TC72222 similar to UniRef100_A7QUD9 Cluster: Chromosome chr11 scaffold_177,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_177, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 958
Score = 109 bits (55), Expect = 2e-23
Identities = 169/207 (81%)
Strand = Plus / Plus
Query: 16 aaaagggattctgtctttgtggaccgtgaaagtcaattggactctttacttccttcctcc 75
|||||||||||| ||| || |||||||||||||||||||| || || | |||||||
Sbjct: 744 aaaagggattctttctatgctgaccgtgaaagtcaattggagtcatttatctcttcctcg 803
Query: 76 actatgtctctctatggccaagatgcttcacattctaatattcgttcttcagctcttagt 135
| ||||| | ||||| ||||| | |||| |||| | | ||||||||||||||||||
Sbjct: 804 tcaatgtcattatatgggcaagactcatcactttctggtctgcgttcttcagctcttagt 863
Query: 136 cgtgttggtgctcccattgttactacggtaatacaaacaatgcaaattccactatcctat 195
|||| |||| |||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 864 cgtgccacccctcctattgttacaacggtaatacaaacaatgcaaataccactgtcctat 923
Query: 196 gcagaggatatcattggtattcaaggg 222
|||||||| || |||||||| ||||||
Sbjct: 924 gcagaggacataattggtatgcaaggg 950