Miyakogusa Predicted Gene
- Lj6g3v1315120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1315120.1 Non Chatacterized Hit- tr|K3YI15|K3YI15_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si013884,35.8,0.000000000000003,Leucine-rich repeats, bacterial
type,NULL; Leucine-rich repeats, typical (most
populate,Leucine-rich,CUFF.59334.1
(1098 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67377 similar to UniRef100_A2Q418 Cluster: Leucine-ri... 1459 0.0
gnl|LJGI|TC79530 similar to UniRef100_A7Q698 Cluster: Chromosome... 208 5e-53
>gnl|LJGI|TC67377 similar to UniRef100_A2Q418 Cluster: Leucine-rich repeat, typical
subtype; n=1; Medicago truncatula|Rep: Leucine-rich
repeat, typical subtype - Medicago truncatula (Barrel
medic), partial (56%)
Length = 821
Score = 1459 bits (736), Expect = 0.0
Identities = 736/736 (100%)
Strand = Plus / Plus
Query: 1 atgatggtgcaacagtttcatcatcaacatcaactaacggtgaagatggataccatgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atgatggtgcaacagtttcatcatcaacatcaactaacggtgaagatggataccatgttg 145
Query: 61 atgaggaagaaggagaaggagaaatcagagaagaacaaaaccaccaacatggagaaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atgaggaagaaggagaaggagaaatcagagaagaacaaaaccaccaacatggagaaagag 205
Query: 121 aagcttcaatttcaaatactggacttgagttgcttgtccttgagctctcttcctaaacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aagcttcaatttcaaatactggacttgagttgcttgtccttgagctctcttcctaaacct 265
Query: 181 tcacttgatttagctaccattagcaaattggacctgtctaataacaatcttcaggaaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tcacttgatttagctaccattagcaaattggacctgtctaataacaatcttcaggaaata 325
Query: 241 ccggagtcgttaacagcgagattgctgaacttggaggagttggacgtgcgctccaatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ccggagtcgttaacagcgagattgctgaacttggaggagttggacgtgcgctccaatcaa 385
Query: 301 ctcacatctcttcccaactccattggctgcctctcaaagctcaagctcttgaatgtttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctcacatctcttcccaactccattggctgcctctcaaagctcaagctcttgaatgtttct 445
Query: 361 ggcaacttcattgaatccctccccaaaaccattgagaattgcagtgccttagaagaactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggcaacttcattgaatccctccccaaaaccattgagaattgcagtgccttagaagaactg 505
Query: 421 aatgccaatttcaacaagttgagcaagctgccagacacaattgggtttgagctcataaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aatgccaatttcaacaagttgagcaagctgccagacacaattgggtttgagctcataaac 565
Query: 481 ctcaagaagctcgcagtcaattccaacaagttggtgctccttccaagctctacctctcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ctcaagaagctcgcagtcaattccaacaagttggtgctccttccaagctctacctctcac 625
Query: 541 ctaacagctctaacggttctcgacgcacgcctgaactgtctcagagctctccccgaaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ctaacagctctaacggttctcgacgcacgcctgaactgtctcagagctctccccgaaaac 685
Query: 601 cttgagaatctcatcaacctagagaccctcaatgtgagtcagaacttccggtacctggac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 cttgagaatctcatcaacctagagaccctcaatgtgagtcagaacttccggtacctggac 745
Query: 661 acactcccctactccatagggctcctcctgtccctggttgaactggatgttagctacaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 acactcccctactccatagggctcctcctgtccctggttgaactggatgttagctacaac 805
Query: 721 aatatcaagaccttgc 736
||||||||||||||||
Sbjct: 806 aatatcaagaccttgc 821
>gnl|LJGI|TC79530 similar to UniRef100_A7Q698 Cluster: Chromosome chr11 scaffold_56,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 544
Score = 208 bits (105), Expect = 5e-53
Identities = 435/543 (80%), Gaps = 3/543 (0%)
Strand = Plus / Plus
Query: 145 ttgagttgcttgtccttgagctctcttcctaaaccttcacttgatttagctaccattagc 204
|||||| || |||||||| |||||||| || ||||| ||| ||||||| | |||| ||
Sbjct: 5 ttgagtggcatgtccttggaatctcttcccaatccttctcttaatttagccatcatttgc 64
Query: 205 aaattggacctgtctaataacaatcttcaggaaataccggagtcgttaacagcgagattg 264
||||||||||| || ||||||||||| ||| | || || ||||||||| | || |||| |
Sbjct: 65 aaattggacctctccaataacaatctccagaatattccagagtcgtta-cggccagatcg 123
Query: 265 ctgaacttggaggagttggacgtgcgctccaatcaactcacatctcttcccaactccatt 324
| | ||| || ||||||||||| ||| || || |||| || || || ||||| ||
Sbjct: 124 tngga--tggtggtgttggacgtgcactctaaccagctcaggtccctcccaaactctgtt 181
Query: 325 ggctgcctctcaaagctcaagctcttgaatgtttctggcaacttcattgaatccctcccc 384
|| |||||||||||||||||| | | || || ||||||||| |||| || | ||| |||
Sbjct: 182 gggtgcctctcaaagctcaaggttctcaacgtctctggcaacctcatcgagtaccttccc 241
Query: 385 aaaaccattgagaattgcagtgccttagaagaactgaatgccaatttcaacaagttgagc 444
||| | |||||||||||||| || ||||||||| ||||||| || ||||||||| |||||
Sbjct: 242 aaatcaattgagaattgcagagcattagaagaattgaatgcaaacttcaacaagctgagc 301
Query: 445 aagctgccagacacaattgggtttgagctcataaacctcaagaagctcgcagtcaattcc 504
|||| ||||||||||| |||||||| ||| ||||||| ||||||||| |||| || |||
Sbjct: 302 cagctaccagacacaatggggtttgaactcctaaacctaaagaagctctcagtaaactcc 361
Query: 505 aacaagttggtgctccttccaagctctacctctcacctaacagctctaacggttctcgac 564
|||||| | || |||| ||| |||| ||||| ||||| || | || | | ||||||
Sbjct: 362 aacaagctcgtcttcctcccacgctccacctcacacctcacctcactcaaaatcctcgac 421
Query: 565 gcacgcctgaactgtctcagagctctccccgaaaaccttgagaatctcatcaacctagag 624
||||| ||||||| || ||| | ||||| || | || ||||||||||||||||| ||
Sbjct: 422 gcacgtttgaactgccttagatccctcccagatgatctcgagaatctcatcaacctcgaa 481
Query: 625 accctcaatgtgagtcagaacttccggtacctggacacactcccctactccatagggctc 684
||||||||||| || || ||||||| |||| ||||||| ||||| ||||||||||| |||
Sbjct: 482 accctcaatgttagccaaaacttccagtacttggacaccctcccttactccataggcctc 541
Query: 685 ctc 687
|||
Sbjct: 542 ctc 544