Miyakogusa Predicted Gene

Lj6g3v1270820.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1270820.1 Non Chatacterized Hit- tr|B9FNJ4|B9FNJ4_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,36.11,0.18,PROTEIN_KINASE_DOM,Protein kinase, catalytic domain;
Protein kinase-like (PK-like),Protein kinase-li,CUFF.59308.1
         (843 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO037047 similar to UniRef100_A7Q6C8 Cluster: Chromosom...   212   3e-54

>gnl|LJGI|GO037047 similar to UniRef100_A7Q6C8 Cluster: Chromosome chr11 scaffold_56,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_56, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 740

 Score =  212 bits (107), Expect = 3e-54
 Identities = 312/375 (83%), Gaps = 4/375 (1%)
 Strand = Plus / Plus

                                                                       
Query: 355 aatctccttggaagtgggggatatgggcctgtctacaggggaaagttggtagatgggagg 414
           ||||| ||||||||||| |||| ||| ||||| ||   ||||||||||| ||||||||||
Sbjct: 362 aatcttcttggaagtggtggatttggacctgtttatcagggaaagttggcagatgggagg 421

                                                                       
Query: 415 atgattgcagtgaagacattgtcccacaacaaatcacaacagggagaaagagaattcctg 474
            ||||||| || |||  |||||| |   |||| || ||||| ||||| | |||||| || 
Sbjct: 422 ctgattgctgttaagcaattgtctcttgacaagtcccaacaaggagataaagaatttcta 481

                                                                       
Query: 475 gcagaggtgaaaatgatcactagcatccagcacaaaaatctggttcgccttctcggatgc 534
           ||||| ||||  |||||||| |||||||| ||||||||||||||||||||| | || || 
Sbjct: 482 gcagaagtgaggatgatcacaagcatccaacacaaaaatctggttcgccttatggggtgt 541

                                                                       
Query: 535 tgcatcgatggacctcaaaggattcttgtctatgaatacatgaaaaacagaagtttggaa 594
           ||||  ||||||||||||||||||||||| |||||||||||||| |||||||||||||| 
Sbjct: 542 tgcactgatggacctcaaaggattcttgtgtatgaatacatgaagaacagaagtttggac 601

                                                                       
Query: 595 ctatttatatatggaaatggtgatcaatttctgaattggagaaccaggttccaaattatt 654
           |  ||| ||||||||||  ||||||||||||| || ||||| || || |||||||| || 
Sbjct: 602 ccctttgtatatggaaacagtgatcaatttctaaactggagcactagattccaaataatc 661

                                                                       
Query: 655 ctcggagttgcgcggggactgcaataccctcatgaggactcacacctcagaattgttcac 714
           ||  |||| ||||||||| |||||||||  ||||| || |||||  | || |||||||||
Sbjct: 662 ct-agagtcgcgcggggattgcaatacctccatga-gattcacatat-ag-attgttcac 717

                          
Query: 715 cgagatatcaaagca 729
           |||||||||||||||
Sbjct: 718 cgagatatcaaagca 732