Miyakogusa Predicted Gene
- Lj6g3v1249680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1249680.1 Non Chatacterized Hit- tr|B9RK72|B9RK72_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,34.58,7e-19,DUF761,Protein of unknown function DUF761, plant;
DUF4408,Domain of unknown function DUF4408,CUFF.59298.1
(688 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76659 799 0.0
gnl|LJGI|AV768872 86 3e-16
gnl|LJGI|TC61516 similar to UniRef100_A7QCA8 Cluster: Chromosome... 58 8e-08
>gnl|LJGI|TC76659
Length = 510
Score = 799 bits (403), Expect = 0.0
Identities = 403/403 (100%)
Strand = Plus / Plus
Query: 1 atgggtgctgaagctgaagaaggaggtgcttcaattacttcagtatatgctactatgata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atgggtgctgaagctgaagaaggaggtgcttcaattacttcagtatatgctactatgata 167
Query: 61 gctagttggctcacaccgtcgtgtctattcatcttgctcaaccttgtcatcggcaccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gctagttggctcacaccgtcgtgtctattcatcttgctcaaccttgtcatcggcaccatc 227
Query: 121 gctatcacctctcgttccgcttgtcaaaaaagaaggcaactcgactcgtgcggcgcccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gctatcacctctcgttccgcttgtcaaaaaagaaggcaactcgactcgtgcggcgcccct 287
Query: 181 tccccctccctgctagaccgagtcacctccttcggactcggttgctgtaaaatcaaacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tccccctccctgctagaccgagtcacctccttcggactcggttgctgtaaaatcaaacca 347
Query: 241 gcagcaaccgtgtcagaatcccagaggagcgttgttgacccggtccagaacagcgactcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gcagcaaccgtgtcagaatcccagaggagcgttgttgacccggtccagaacagcgactcg 407
Query: 301 ccccggctcaaccgggtcccctcgtcctgtgaaattgcgaaccctgcagctccggaccgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ccccggctcaaccgggtcccctcgtcctgtgaaattgcgaaccctgcagctccggaccgg 467
Query: 361 gacccgaatgagctaggccagaatcaacttccctgcgatgggc 403
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gacccgaatgagctaggccagaatcaacttccctgcgatgggc 510
>gnl|LJGI|AV768872
Length = 274
Score = 85.7 bits (43), Expect = 3e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 634 atgcagaggcttgactccattctacgttacaggaacatgctccgaagaaattgag 688
||||| |||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 274 atgcaaaggcttgactcccttttacgttacaggaacatgctccgaagaaattgag 220
>gnl|LJGI|TC61516 similar to UniRef100_A7QCA8 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 976
Score = 58.0 bits (29), Expect = 8e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 58 atagctagttggctcacaccgtcgtgtctattcatcttgctcaaccttgtcatcggcacc 117
|||||||||||| ||||||| || | || |||||| | ||||||| |||||||| |||
Sbjct: 111 atagctagttggatcacaccctcttccctcttcatcctcgtcaacctcgtcatcggaacc 170
Query: 118 atcgctatcacctctcg 134
||||| |||||||||||
Sbjct: 171 atcgcaatcacctctcg 187