Miyakogusa Predicted Gene
- Lj6g3v1239560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1239560.1 tr|G7IIL3|G7IIL3_MEDTR RecA OS=Medicago
truncatula GN=MTR_2g039670 PE=3 SV=1,84.98,0,RECA_1,DNA
recombination/repair protein RecA, conserved site; DNA REPAIR PROTEIN
RECA,DNA recombinat,CUFF.59283.1
(1284 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS338603 homologue to UniRef100_A7PE62 Cluster: Chromos... 704 0.0
gnl|LJGI|AV408098 similar to UniRef100_A7PE62 Cluster: Chromosom... 258 8e-68
>gnl|LJGI|FS338603 homologue to UniRef100_A7PE62 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (44%)
Length = 709
Score = 704 bits (355), Expect = 0.0
Identities = 355/355 (100%)
Strand = Plus / Plus
Query: 1 atggcgaggctgcttcgcaacgccaacacgttccttctcaagcgctctttccttcaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atggcgaggctgcttcgcaacgccaacacgttccttctcaagcgctctttccttcaccat 98
Query: 61 aaccttcccactcgttcttgctatgaacaaggagtagtgggcacgtctcaagttttgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 aaccttcccactcgttcttgctatgaacaaggagtagtgggcacgtctcaagttttgagc 158
Query: 121 ttttcaacgcataaaggtaaaaggcgctctaagtcagatggagatgagtctagtgaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ttttcaacgcataaaggtaaaaggcgctctaagtcagatggagatgagtctagtgaagag 218
Query: 181 aacatgtctaaaaaagatttggccctacaacaagccctagatcagatcacttctgcattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aacatgtctaaaaaagatttggccctacaacaagccctagatcagatcacttctgcattt 278
Query: 241 ggaaagggatctatcatgtggcttggtcgttctgtctcacccaaaaatgtacctgtggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ggaaagggatctatcatgtggcttggtcgttctgtctcacccaaaaatgtacctgtggtg 338
Query: 301 tcaactggttcttttgctcttgatatagctcttggaatcggtggtcttccaaagg 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tcaactggttcttttgctcttgatatagctcttggaatcggtggtcttccaaagg 393
Score = 632 bits (319), Expect = e-180
Identities = 319/319 (100%)
Strand = Plus / Plus
Query: 441 aggctattgtgcctttgttgatgctgagcatgcacttgataagacacttgcagagtctat 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aggctattgtgcctttgttgatgctgagcatgcacttgataagacacttgcagagtctat 450
Query: 501 tggggtaaatactaagaacttgcttctctcacaaccagattgtggtgaacaagcacttag 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tggggtaaatactaagaacttgcttctctcacaaccagattgtggtgaacaagcacttag 510
Query: 561 ccttgtggataccttaatccggagtggttcagttgatgtagttgttgttgacagtgtggc 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ccttgtggataccttaatccggagtggttcagttgatgtagttgttgttgacagtgtggc 570
Query: 621 tgctcttgttcctaaaggtgagcttgatggtgagatgggtgatgctcatatggcaatgca 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tgctcttgttcctaaaggtgagcttgatggtgagatgggtgatgctcatatggcaatgca 630
Query: 681 agctaggttgatgagccaggcactgcggaaattgtgccactccttgtcactttcacaatg 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 agctaggttgatgagccaggcactgcggaaattgtgccactccttgtcactttcacaatg 690
Query: 741 tatattgatttttataaac 759
|||||||||||||||||||
Sbjct: 691 tatattgatttttataaac 709
>gnl|LJGI|AV408098 similar to UniRef100_A7PE62 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 231
Score = 258 bits (130), Expect = 8e-68
Identities = 202/226 (89%)
Strand = Plus / Plus
Query: 173 gtgaagagaacatgtctaaaaaagatttggccctacaacaagccctagatcagatcactt 232
||||||||||||||||||| ||||| |||||||| |||||||| || |||||||| ||||
Sbjct: 6 gtgaagagaacatgtctaagaaagacttggcccttcaacaagctcttgatcagattactt 65
Query: 233 ctgcatttggaaagggatctatcatgtggcttggtcgttctgtctcacccaaaaatgtac 292
| ||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||
Sbjct: 66 ccgcatttggaaaaggatctattatgtggcttggtcgctctgtctcaccaaaaaatgtac 125
Query: 293 ctgtggtgtcaactggttcttttgctcttgatatagctcttggaatcggtggtcttccaa 352
|||| ||| | ||||||||||||||||| ||| |||| || ||||| ||||| |||||||
Sbjct: 126 ctgttgtgcctactggttcttttgctctagatttagcactaggaattggtggccttccaa 185
Query: 353 aggggcgtgttgtggaaatatttggtcccgaggcttctgggaaaac 398
|||| |||||||||||||||| |||||| ||||||||||| |||||
Sbjct: 186 agggacgtgttgtggaaatatatggtccagaggcttctggaaaaac 231