Miyakogusa Predicted Gene

Lj6g3v1211610.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1211610.1 tr|G7I4A7|G7I4A7_MEDTR Integral membrane protein
OS=Medicago truncatula GN=MTR_1g008180 PE=4 SV=1,69.49,2e-17,
,CUFF.59244.1
         (501 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO028445 similar to UniRef100_A7PE25 Cluster: Chromosom...   601   e-171
gnl|LJGI|FS358867 similar to UniRef100_A7PE25 Cluster: Chromosom...    92   4e-18

>gnl|LJGI|GO028445 similar to UniRef100_A7PE25 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (33%)
          Length = 582

 Score =  601 bits (303), Expect = e-171
 Identities = 303/303 (100%)
 Strand = Plus / Minus

                                                                       
Query: 199 aaaaaagctcagaaagcaaacaatatatggtggcgctcaagtggcctgcttggggatcaa 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aaaaaagctcagaaagcaaacaatatatggtggcgctcaagtggcctgcttggggatcaa 523

                                                                       
Query: 259 aatcgtttcctgatgtacattgtgtttcaaggcatgtttactgtggcaaccacagcccta 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aatcgtttcctgatgtacattgtgtttcaaggcatgtttactgtggcaaccacagcccta 463

                                                                       
Query: 319 actgttcccattttcttatcatatgaattgtctgtagttttccaaatactgaagatttct 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 actgttcccattttcttatcatatgaattgtctgtagttttccaaatactgaagatttct 403

                                                                       
Query: 379 gcatcagcatggaatgggggaagctttgtgttagatgtaatgccaaagcaggtgattctc 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gcatcagcatggaatgggggaagctttgtgttagatgtaatgccaaagcaggtgattctc 343

                                                                       
Query: 439 aaggagaaaaagaaatcagaggtcatccagcatgcgcaaattcaaaaacaaccatcatag 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aaggagaaaaagaaatcagaggtcatccagcatgcgcaaattcaaaaacaaccatcatag 283

              
Query: 499 aaa 501
           |||
Sbjct: 282 aaa 280


>gnl|LJGI|FS358867 similar to UniRef100_A7PE25 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 472

 Score = 91.7 bits (46), Expect = 4e-18
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                       
Query: 302 tggcaaccacagccctaactgttcccattttcttatcatatgaattgtctgtagttttcc 361
           |||||||||  || || ||||| ||||| ||||| ||||||||||||  ||||| |||||
Sbjct: 472 tggcaaccatggcacttactgtccccatattcttgtcatatgaattgcatgtagctttcc 413

                                                                       
Query: 362 aaatactgaagatttctgcatcagcatggaatgggggaagctttgtgttagatgtaatgc 421
           ||||||| ||| |||| || |||  ||||||||| | ||| ||| |||| || |||||||
Sbjct: 412 aaatactcaaggtttcggcttcaatatggaatggagcaagttttctgttggaagtaatgc 353

                                                 
Query: 422 caaagcaggtgattctcaaggagaaaaagaaatcagag 459
           | | |||||  ||||| |||||||||||||| ||||||
Sbjct: 352 ctaggcaggcaattctgaaggagaaaaagaagtcagag 315