Miyakogusa Predicted Gene
- Lj6g3v1201450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1201450.1 Non Chatacterized Hit- tr|I3SFU1|I3SFU1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,96.06,0,Snf7,Snf7; CHARGED MULTIVESICULAR BODY PROTEIN 2A
(CHROMATIN-MODIFYING PROTEIN 2A)(CHMP2A)(VACUOLAR ,CUFF.59247.1
(672 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59441 similar to UniRef100_A7PE04 Cluster: Chromosome... 1166 0.0
gnl|LJGI|TC57638 homologue to UniRef100_A7PE04 Cluster: Chromoso... 216 1e-55
>gnl|LJGI|TC59441 similar to UniRef100_A7PE04 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 910
Score = 1166 bits (588), Expect = 0.0
Identities = 588/588 (100%)
Strand = Plus / Plus
Query: 1 atgttggacaaatcgattagagaaattgagcgcgagaggcaaggtttacaagcacaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atgttggacaaatcgattagagaaattgagcgcgagaggcaaggtttacaagcacaagag 230
Query: 61 aagaaattgattttggagataaagaaaagtgccaaacaaggccaaatgggagctgttaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aagaaattgattttggagataaagaaaagtgccaaacaaggccaaatgggagctgttaga 290
Query: 121 gttatggcaaaagatcttgttagaacaaggcatcaggttgaaaagttttataagctaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gttatggcaaaagatcttgttagaacaaggcatcaggttgaaaagttttataagctaaaa 350
Query: 181 tcgcagctccaaggtgtatctctcagaattcagacattgaagtcaacacaagcaatgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tcgcagctccaaggtgtatctctcagaattcagacattgaagtcaacacaagcaatgggt 410
Query: 241 gaggcgatgaaaggggtgacgaaggcgatggggcaaatgaataggcaaatgaacttgcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gaggcgatgaaaggggtgacgaaggcgatggggcaaatgaataggcaaatgaacttgcca 470
Query: 301 tctttgcagaaaatcatgcaagaatttgagagacagaatgagaagatggaattgacgact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tctttgcagaaaatcatgcaagaatttgagagacagaatgagaagatggaattgacgact 530
Query: 361 gaggtgatgggagatgcaatagatgatgctttggaaggggatgaggaagaagaggaaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gaggtgatgggagatgcaatagatgatgctttggaaggggatgaggaagaagaggaaaca 590
Query: 421 gacgatctagtgaaccaggttcttgatgagattggaattaatgtaaaccaagagcttttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gacgatctagtgaaccaggttcttgatgagattggaattaatgtaaaccaagagcttttg 650
Query: 481 aatgcaccatcatctgctgttgctgctccagctgcaagtactaaggttcctcaagttgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aatgcaccatcatctgctgttgctgctccagctgcaagtactaaggttcctcaagttgaa 710
Query: 541 actgcagcgactgatgatggcgggatagatagtgatttacaggcaagg 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 actgcagcgactgatgatggcgggatagatagtgatttacaggcaagg 758
>gnl|LJGI|TC57638 homologue to UniRef100_A7PE04 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (96%)
Length = 947
Score = 216 bits (109), Expect = 1e-55
Identities = 331/405 (81%)
Strand = Plus / Plus
Query: 55 caagagaagaaattgattttggagataaagaaaagtgccaaacaaggccaaatgggagct 114
||||| ||||| |||||| | ||||| ||||| | ||| |||||||| || ||||| ||
Sbjct: 227 caagaaaagaagttgattgtagagatcaagaagaatgctaaacaaggacagatgggggcg 286
Query: 115 gttagagttatggcaaaagatcttgttagaacaaggcatcaggttgaaaagttttataag 174
|| ||||| ||||| || |||||| | |||| | |||||| ||||||||||||| |||
Sbjct: 287 gtgagagtgatggccaaggatcttatccgaactcgccatcagattgaaaagttttacaag 346
Query: 175 ctaaaatcgcagctccaaggtgtatctctcagaattcagacattgaagtcaacacaagca 234
|| ||||| || ||||| ||||| ||| | ||||||||||| | || || || |||||
Sbjct: 347 cttaaatcccaactccagggtgtttctttgagaattcagactctaaaatctacccaagcg 406
Query: 235 atgggtgaggcgatgaaaggggtgacgaaggcgatggggcaaatgaataggcaaatgaac 294
||||| ||||| |||||||| || || ||||| ||||| |||||||||||| |||||
Sbjct: 407 atgggagaggctatgaaaggagtaactaaggcaatgggtcaaatgaataggaggatgaat 466
Query: 295 ttgccatctttgcagaaaatcatgcaagaatttgagagacagaatgagaagatggaattg 354
||||| || || ||||| || |||||||| ||||| | |||||||||||||||||| ||
Sbjct: 467 ttgccttccttacagaagataatgcaagagtttgaacggcagaatgagaagatggaactg 526
Query: 355 acgactgaggtgatgggagatgcaatagatgatgctttggaaggggatgaggaagaagag 414
| |||||||||||||||||||||| ||||||||| ||||||| ||||| || || ||
Sbjct: 527 gtgtctgaggtgatgggagatgcaattgatgatgctctggaaggtgatgaagaggaggaa 586
Query: 415 gaaacagacgatctagtgaaccaggttcttgatgagattggaatt 459
|| |||||||| || || || ||||||||||||||||||||||||
Sbjct: 587 gagacagacgagcttgtcaatcaggttcttgatgagattggaatt 631