Miyakogusa Predicted Gene
- Lj6g3v1201420.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1201420.2 tr|Q9VPL9|Q9VPL9_DROME KISMET-L long isoform
OS=Drosophila melanogaster GN=kis PE=2
SV=3,35.96,0.001,seg,NULL,CUFF.59241.2
(405 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72909 similar to UniRef100_Q58NH9 Cluster: Genome pol... 494 e-139
gnl|LJGI|BW595898 similar to UniRef100_Q9TD50 Cluster: NADH-ubiq... 416 e-116
gnl|LJGI|AU252126 similar to UniRef100_UPI000016335A Cluster: CH... 139 1e-32
gnl|LJGI|DC599611 80 1e-14
>gnl|LJGI|TC72909 similar to UniRef100_Q58NH9 Cluster: Genome polyprotein; n=1;
Hepatitis C virus|Rep: Genome polyprotein - Hepatitis C
virus, partial (21%)
Length = 570
Score = 494 bits (249), Expect = e-139
Identities = 307/331 (92%), Gaps = 19/331 (5%)
Strand = Plus / Plus
Query: 1 atgaatcaaccatggctgcccccttttcctgacaacggacgaggaagcgacgcagactct 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atgaaccaaccatggctgcccccttttcctgacaacggacgaggaagcgacgcagactct 176
Query: 61 tctcccttctcccgcgactatgtcaacggtgacaacgttaattccaacacaatccttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tctcccttctcccgcgactatgtcaacggtgacaacgttaattccaacacaatccttctt 236
Query: 121 ctttcgcttcccctcccgtcagttagtgttcgggaactacgtctattt------------ 168
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 237 ctttcgcttcccctcccgtcagttagtgttcgggaactacatctattttgctgtgcagtt 296
Query: 169 -------cgctgtgcccagcaccccgccgctgtcaattttcgatggccaattgctccagg 221
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcatctccgctgagcccagcaccccgccgctgtcaattttcgatggccaattgctccagg 356
Query: 222 agcaatatcagagtccaacttcgatggatatcatggaaacgacggagacaaaggttgcag 281
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 357 agcaatatcagagtccaactccgatggatatcatggaaacgacggagacaaaggttgcag 416
Query: 282 aaacaacatttttacaagatgggagaaaggt 312
||||||||||||||||| |||||||||||||
Sbjct: 417 aaacaacatttttacaaaatgggagaaaggt 447
>gnl|LJGI|BW595898 similar to UniRef100_Q9TD50 Cluster: NADH-ubiquinone oxidoreductase
chain 2; n=1; Cynolebias alexandri|Rep: NADH-ubiquinone
oxidoreductase chain 2 - Cynolebias alexandri, partial
(6%)
Length = 488
Score = 416 bits (210), Expect = e-116
Identities = 313/351 (89%), Gaps = 26/351 (7%)
Strand = Plus / Plus
Query: 1 atgaatcaaccatggctgcccccttttcctgacaacggacgaggaagcgacgcagactct 60
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 145 atgaaccaaccatggctgcccccttttcctgacaacgggcgaggaagcgacgcagactct 204
Query: 61 tctcccttctcccgcgactatgtcaacggtgacaacgttaattccaacacaatccttctt 120
||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||
Sbjct: 205 tctcccttctcccgcgactatgtcaacggtgacaa-gttaattccgacactatccttctt 263
Query: 121 ctttcgcttcccctcccgtcagttagtgttcgggaactacgtctatttcgctgt------ 174
||||||||||||||||||| ||||||||||||||||||| || |||||||||||
Sbjct: 264 ctttcgcttcccctcccgtgagttagtgttcgggaactatgtatatttcgctgtgcagtt 323
Query: 175 -------------gcccagcaccccgccgctgtcaattttcgatggccaattgctccagg 221
||||||||||| | | | ||||||||||||||||||||||||||||
Sbjct: 324 tcatctccgctgagcccagcaccctgtccccttcaattttcgatggccaattgctccagg 383
Query: 222 agcaatatcagagtccaacttcgatggatatcatggaaacgacggagacaaaggttgcag 281
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 agcaatatcagagtccaacttcgatggatatcatggaaac------gacaaaggttgcag 437
Query: 282 aaacaacatttttacaagatgggagaaaggtaaaatggttctactggataa 332
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aaacaacatttttacaagatgggagaaaggtaaaatggttctactggataa 488
>gnl|LJGI|AU252126 similar to UniRef100_UPI000016335A Cluster: CHR11
(CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase;
n=1; Arabidopsis thaliana|Rep: CHR11
(CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase
- Arabidopsis thaliana, partial (5%)
Length = 350
Score = 139 bits (70), Expect = 1e-32
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 309 aggtaaaatggttctactggataaattactttccaaactaaaggaacgggattccagggc 368
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 222 aggtaaaatggttctactggataaattactttccaaactaaaagaacnggattccagggc 281
Query: 369 acttaaatttacacagg 385
|||||||||||||||||
Sbjct: 282 acttaaatttacacagg 298
>gnl|LJGI|DC599611
Length = 179
Score = 79.8 bits (40), Expect = 1e-14
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 25 tttcctgacaacggacgaggaagcgacgcagactcttctcccttctcccgcgactatg 82
|||||||||||||||||||||| || || |||||||||||||||||||||||||||
Sbjct: 122 tttcctgacaacggacgaggaaancacncaaactcttctcccttctcccgcgactatg 179