Miyakogusa Predicted Gene

Lj6g3v1201410.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1201410.1 Non Chatacterized Hit- tr|I1L1N1|I1L1N1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,77.66,0,MS_channel,Mechanosensitive ion channel MscS; Sm-like
ribonucleoproteins,Like-Sm (LSM) domain; SUBFA,CUFF.59240.1
         (2298 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP063131 similar to UniRef100_A7PE01 Cluster: Chromosom...   414   e-114
gnl|LJGI|TC66057 weakly similar to UniRef100_A7QN75 Cluster: Chr...    76   1e-12

>gnl|LJGI|BP063131 similar to UniRef100_A7PE01 Cluster: Chromosome chr11 scaffold_13,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr11 scaffold_13, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (11%)
          Length = 469

 Score =  414 bits (209), Expect = e-114
 Identities = 262/280 (93%)
 Strand = Plus / Minus

                                                                        
Query: 2014 attggagctttaaaggctaagttaaaagcatacttggatagtaagcctcaacactggcgt 2073
            ||||||||||||||||||||||||||||| |||||||| ||||  |||| ||||||||||
Sbjct: 461  attggagctttaaaggctaagttaaaagcgtacttggagagtagncctccacactggcgt 402

                                                                        
Query: 2074 ccgaaccacagtgtaattgttaaggatattgagaacgtaaacaagatgaaaatgggtcta 2133
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 401  ccgaaccacagtgtaatagttaaggatattgagaacgtaaacaagatgaaaatggctcta 342

                                                                        
Query: 2134 tatgttactcacaccatcaattttcagaattatggggataagaacagccgaagatctgat 2193
            ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| 
Sbjct: 341  tatgttactcacaccatcaattttcagaactatgtggataagaacagccgaagatctgaa 282

                                                                        
Query: 2194 ttagtcctggagttaaagaaaagtcttgaagatctcagtattaaatatcatctgctgcca 2253
            |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||
Sbjct: 281  ttagtcctggagttaaagaaaaatcttgaagatctaagtattaaatatcatctgctacca 222

                                                    
Query: 2254 caagaggttcatctcagtaaagtaaaatccgaagactcaa 2293
            ||||| |||||||||||| | |||| ||| ||||||||||
Sbjct: 221  caagaagttcatctcagttatgtaagatcagaagactcaa 182


>gnl|LJGI|TC66057 weakly similar to UniRef100_A7QN75 Cluster: Chromosome undetermined
            scaffold_131, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_131, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (23%)
          Length = 628

 Score = 75.8 bits (38), Expect = 1e-12
 Identities = 110/134 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1828 gatggtgttcagatgattgtagaagagatgaacatactgtcaacagtctttttgagatat 1887
            |||||||||||||||||||| ||||||||||| ||  || ||||||| ||| |  |||||
Sbjct: 2    gatggtgttcagatgattgtggaagagatgaatatcttgacaacagtgtttcttcgatat 61

                                                                        
Query: 1888 gacaatgaaaagatattttacccaaattcagttttgtcaaccaagccaatcagtaacttc 1947
            |||||||| || ||||  ||||| ||  ||||||||   || |||||||| || || |||
Sbjct: 62   gacaatgagaaaatatactaccctaacgcagttttgctcactaagccaataagcaatttc 121

                          
Query: 1948 tacaggagtccaga 1961
            || |||||||||||
Sbjct: 122  tataggagtccaga 135