Miyakogusa Predicted Gene
- Lj6g3v1201400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1201400.1 tr|Q6WG36|Q6WG36_PEA RPA 70kDa subunit OS=Pisum
sativum PE=2 SV=1,81.35,0,REPLICATION FACTOR A 1, RFA1,NULL; Nucleic
acid-binding proteins,Nucleic acid-binding, OB-fold-like;,CUFF.59251.1
(1881 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57610 similar to UniRef100_Q6WG36 Cluster: RPA 70kDa ... 1548 0.0
gnl|LJGI|TC67590 similar to UniRef100_Q6WG36 Cluster: RPA 70kDa ... 763 0.0
>gnl|LJGI|TC57610 similar to UniRef100_Q6WG36 Cluster: RPA 70kDa subunit; n=1; Pisum
sativum|Rep: RPA 70kDa subunit - Pisum sativum (Garden
pea), partial (35%)
Length = 937
Score = 1548 bits (781), Expect = 0.0
Identities = 781/781 (100%)
Strand = Plus / Plus
Query: 1 atgtcggtgaatctgacggcgaacgcgattccgacgattatcggcggcgacgtgaacgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 atgtcggtgaatctgacggcgaacgcgattccgacgattatcggcggcgacgtgaacgcg 216
Query: 61 aagccgctagtccaggttctcgacgttgccttagtctccggcggcaacaactctcagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 aagccgctagtccaggttctcgacgttgccttagtctccggcggcaacaactctcagcag 276
Query: 121 cagcagaggtaccgtgttgtgctctctgacgccgtttcgtctcaccaagccatgctcgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cagcagaggtaccgtgttgtgctctctgacgccgtttcgtctcaccaagccatgctcgcc 336
Query: 181 gctcagctcaatgaccatgtccgaaacggccgagtgaagaagggttccgtcgttcagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gctcagctcaatgaccatgtccgaaacggccgagtgaagaagggttccgtcgttcagctt 396
Query: 241 atcgattatatatgctctactctccagaatcgcaagattattgtggtgcttaacatggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atcgattatatatgctctactctccagaatcgcaagattattgtggtgcttaacatggaa 456
Query: 301 actataattctggattgcgagatcattgggaacccgaagtcatttatgaattctgattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 actataattctggattgcgagatcattgggaacccgaagtcatttatgaattctgattta 516
Query: 361 ccaattttgagaaatgctgcggagaatttgcccaggagtagtggtaataatttggctgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ccaattttgagaaatgctgcggagaatttgcccaggagtagtggtaataatttggctgct 576
Query: 421 aagaatgcaagtcataatgtgcagaatttcagaccaacggttcaaccggcataccaacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aagaatgcaagtcataatgtgcagaatttcagaccaacggttcaaccggcataccaacca 636
Query: 481 cctcctgtttacaaaggtcgtggtgcgattgtgaaaaatgaggcaccggcacgcgtcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 cctcctgtttacaaaggtcgtggtgcgattgtgaaaaatgaggcaccggcacgcgtcatt 696
Query: 541 cctattgctgctttaaatccttatcaaggtaggtgggctatcaaggcaagggtaacagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 cctattgctgctttaaatccttatcaaggtaggtgggctatcaaggcaagggtaacagct 756
Query: 601 aaaggggatctgcgccgctataataatgctcgtggagatgggaaagtcttctcgtttgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 aaaggggatctgcgccgctataataatgctcgtggagatgggaaagtcttctcgtttgat 816
Query: 661 cttcttgattctgatggaggtgaaatacgagtaacatgctttaattctgtagttgatcgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 cttcttgattctgatggaggtgaaatacgagtaacatgctttaattctgtagttgatcgc 876
Query: 721 ttctatgattcaattgaggctggtaaagtttacttgatatccagaggtagcttgaaacct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 ttctatgattcaattgaggctggtaaagtttacttgatatccagaggtagcttgaaacct 936
Query: 781 g 781
|
Sbjct: 937 g 937
>gnl|LJGI|TC67590 similar to UniRef100_Q6WG36 Cluster: RPA 70kDa subunit; n=1; Pisum
sativum|Rep: RPA 70kDa subunit - Pisum sativum (Garden
pea), partial (20%)
Length = 630
Score = 763 bits (385), Expect = 0.0
Identities = 385/385 (100%)
Strand = Plus / Plus
Query: 1497 gtcagggaacatgagttggcaatgtgatagatgcaaccaagagtttgaggagtgtgacta 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcagggaacatgagttggcaatgtgatagatgcaaccaagagtttgaggagtgtgacta 60
Query: 1557 ccggtaccttctccaagctcaaatcctggatcacacaggattaacttgggtaactgcttt 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccggtaccttctccaagctcaaatcctggatcacacaggattaacttgggtaactgcttt 120
Query: 1617 ccaggaagcaggggaagagattatggggtgctccgcaaaggagttgtacttcttgaaaaa 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccaggaagcaggggaagagattatggggtgctccgcaaaggagttgtacttcttgaaaaa 180
Query: 1677 tgaagagcaggatgacgacaggtttggagaaataatcaagagtaaactcttcaaccattt 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaagagcaggatgacgacaggtttggagaaataatcaagagtaaactcttcaaccattt 240
Query: 1737 tgtattcaagctgaaaataaaagaggaattatatggtgacgaacagaaggtgaagattac 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtattcaagctgaaaataaaagaggaattatatggtgacgaacagaaggtgaagattac 300
Query: 1797 agtggtcaaggcagatcaggtgaattattcttcagagagtagatacatgcttgatttgat 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtggtcaaggcagatcaggtgaattattcttcagagagtagatacatgcttgatttgat 360
Query: 1857 ttccaaattttgtaggcagtgattg 1881
|||||||||||||||||||||||||
Sbjct: 361 ttccaaattttgtaggcagtgattg 385