Miyakogusa Predicted Gene

Lj6g3v1201360.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1201360.1 Non Chatacterized Hit- tr|K4A1U8|K4A1U8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si032843,38.1,8e-17,seg,NULL; S_R_A_B_BARREL,Stress responsive
alpha-beta barrel; Stress responsive A/B Barrel Domain,St,CUFF.59239.1
         (648 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70914 weakly similar to UniRef100_A7PDZ5 Cluster: Chr...    82   5e-15

>gnl|LJGI|TC70914 weakly similar to UniRef100_A7PDZ5 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (40%)
          Length = 1064

 Score = 81.8 bits (41), Expect = 5e-15
 Identities = 110/133 (82%)
 Strand = Plus / Plus

                                                                       
Query: 183 cttcacccacttgctccacagccgctacgactcaaaggaggatctcgaagcctacaatgc 242
           |||||||||| ||||||||||||||||  |||| ||||| |||||||| ||||||   ||
Sbjct: 382 cttcacccacatgctccacagccgctataactccaaggaagatctcgacgcctactccgc 441

                                                                       
Query: 243 gcaccctcgccacctcggcgccgtcaggggctccctcttccctatctgcggcgacctcat 302
            |||||  |||||||||||| |||||||||     || |||| |||  || |||||||||
Sbjct: 442 tcaccccagccacctcggcgtcgtcagggggaatgtcctccccatcatcgacgacctcat 501

                        
Query: 303 ggccgtcgattgg 315
           |||||||||||||
Sbjct: 502 ggccgtcgattgg 514