Miyakogusa Predicted Gene
- Lj6g3v1187470.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1187470.2 Non Chatacterized Hit- tr|I1MHF8|I1MHF8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20654
PE,82.72,0,TTL,Tubulin-tyrosine ligase; RNI-like,NULL; seg,NULL;
SUBFAMILY NOT NAMED,NULL; TUBULIN TYROSINE LIG,CUFF.59219.2
(2601 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024122 similar to UniRef100_Q10QY3 Cluster: Tubulin-t... 959 0.0
gnl|LJGI|CB828906 weakly similar to UniRef100_A9RKG7 Cluster: Pr... 492 e-138
gnl|LJGI|TC75393 similar to UniRef100_Q10QY3 Cluster: Tubulin-ty... 149 1e-34
>gnl|LJGI|GO024122 similar to UniRef100_Q10QY3 Cluster: Tubulin-tyrosine ligase family
protein, expressed; n=1; Oryza sativa Japonica Group|Rep:
Tubulin-tyrosine ligase family protein, expressed - Oryza
sativa subsp. japonica (Rice), partial (21%)
Length = 489
Score = 959 bits (484), Expect = 0.0
Identities = 487/488 (99%)
Strand = Plus / Plus
Query: 1647 gcatccggagtttgcaattacaaaggaaccaaaagatgcagatataatatggacatgtat 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcatccggagtttgcaattacaaaggaaccaaaagatgcagatataatatggacatgtat 61
Query: 1707 gcagatagatgaggatacaaagaaggccacaggaataacagatcagcaatacattaatca 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gcagatagatgaggatacaaagaaggccacaggaataacagatcagcaatacattaatca 121
Query: 1767 atttccttttgaggcttgtcttgtcatgaaacatcatttagcggagacaattcagaaggc 1826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atttccttttgaggcttgtcttgtcatgaaacatcatttagcggagacaattcagaaggc 181
Query: 1827 acttggatctcctcaatggttgcagcatacttataatcttgaaacacatctatctcaact 1886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acttggatctcctcaatggttgcagcatacttataatcttgaaacacatctatctcaact 241
Query: 1887 tattggtgactattatttacgcaaaagagaaggacaagacaatctttggatcctaaaacc 1946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tattggtgactattatttacgcaaaagagaaggacaagacaatctttggatcctaaaacc 301
Query: 1947 ctggaacatggcccgaactattgatactactgtaactgataatttacctgcgataatccg 2006
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 302 ctggaacatggcccgaactattgatactactgtaactgataatttacctgcgataatctg 361
Query: 2007 tctcatggaaactggtccaaaaatttgccagaagtatattgaaaaacctgctttgttcca 2066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tctcatggaaactggtccaaaaatttgccagaagtatattgaaaaacctgctttgttcca 421
Query: 2067 ggggaaaaagtttgatctccgttacatagtgttggttcggagcatgcaccctttggagat 2126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggggaaaaagtttgatctccgttacatagtgttggttcggagcatgcaccctttggagat 481
Query: 2127 attcctgt 2134
||||||||
Sbjct: 482 attcctgt 489
>gnl|LJGI|CB828906 weakly similar to UniRef100_A9RKG7 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(9%)
Length = 513
Score = 492 bits (248), Expect = e-138
Identities = 251/252 (99%)
Strand = Plus / Plus
Query: 2350 gcagccgctgttgcacatccagagatgcatagtccaacatcaagagcaatgtacggtgta 2409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagccgctgttgcacatccagagatgcatagtccaacatcaagagcaatgtacggtgta 60
Query: 2410 gatgttatgttgaacagctctttccaacccaagttactagaggtgacgtactgccctgat 2469
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgttatgttggacagctctttccaacccaagttactagaggtgacgtactgccctgat 120
Query: 2470 tgtacaagagcttgcaaatatgacatggatatcgtggttggagagggaggtgtttccaaa 2529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtacaagagcttgcaaatatgacatggatatcgtggttggagagggaggtgtttccaaa 180
Query: 2530 ggttgtgatttcttcaacaatgtcttcaggtgtctctttttggatgaaatttcgcaagtt 2589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggttgtgatttcttcaacaatgtcttcaggtgtctctttttggatgaaatttcgcaagtt 240
Query: 2590 agcccattgtag 2601
||||||||||||
Sbjct: 241 agcccattgtag 252
>gnl|LJGI|TC75393 similar to UniRef100_Q10QY3 Cluster: Tubulin-tyrosine ligase family
protein, expressed; n=1; Oryza sativa Japonica Group|Rep:
Tubulin-tyrosine ligase family protein, expressed - Oryza
sativa subsp. japonica (Rice), partial (4%)
Length = 483
Score = 149 bits (75), Expect = 1e-34
Identities = 104/111 (93%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 1250 ggtatgtgatggatgagcttgg-ttctgctttgcggca-cagtgatgagccaaatttcag 1307
||||||||||||||||||| || |||||||||||| | |||||||||||||||||||||
Sbjct: 10 ggtatgtgatggatgagctggggttctgctttgcgccttcagtgatgagccaaatttcag 69
Query: 1308 agtggcaccttttcttttcatgccagagggtaatctggcatcagctgtgag 1358
| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 aaaggcaccttttcttttcatgccagagggtaatctggcatcagctgtgag 120