Miyakogusa Predicted Gene

Lj6g3v1187440.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1187440.1 CUFF.59218.1
         (1077 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO012912 UniRef100_Q40743 Cluster: Variable copy number...   137   2e-31

>gnl|LJGI|GO012912 UniRef100_Q40743 Cluster: Variable copy number DNA; n=2; Oryza
            sativa|Rep: Variable copy number DNA - Oryza sativa
            (Rice), partial (12%)
          Length = 285

 Score =  137 bits (69), Expect = 2e-31
 Identities = 69/69 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1009 agaaagatttcaacgctaagacatcaatcgcacatgtcaagagaagcaactgaacatgga 1068
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55   agaaagatttcaacgctaagacatcaatcgcacatgtcaagagaagcaactgaacatgga 114

                     
Query: 1069 gcttaattc 1077
            |||||||||
Sbjct: 115  gcttaattc 123