Miyakogusa Predicted Gene

Lj6g3v1177360.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1177360.1 tr|B9VI84|B9VI84_ORYSJ Truncated keratin
associated protein OS=Oryza sativa subsp. japonica GN=pay1
,42.61,7e-17,G-gamma,G-protein gamma-like domain; seg,NULL;
coiled-coil,NULL,CUFF.59209.1
         (507 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75865 UniRef100_A7QDM3 Cluster: Chromosome chr10 scaf...    76   2e-13

>gnl|LJGI|TC75865 UniRef100_A7QDM3 Cluster: Chromosome chr10 scaffold_81, whole
           genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_81, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 619

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                       
Query: 55  ctgccttctcctaaggcgccactggggtgccctgatttgtatgggaaacggcgtcagaca 114
           ||||| ||||| ||||||||||| | ||||||||||| |||||||||| ||||| |    
Sbjct: 490 ctgccctctcccaaggcgccactagcgtgccctgattcgtatgggaaaaggcgttaagtg 549

                                                     
Query: 115 gcaaaaattcagatgctggaaagagagataagttttcttgag 156
           |  | | || ||||||||||||||||||||||||||||||||
Sbjct: 550 gacagagtttagatgctggaaagagagataagttttcttgag 591