Miyakogusa Predicted Gene
- Lj6g3v1177310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1177310.1 tr|G7IGG7|G7IGG7_MEDTR
Methylthioribose-1-phosphate isomerase OS=Medicago truncatula
GN=MTR_2g042450,85.16,0,IF-2B,Initiation factor 2B-related; no
description,NULL; seg,NULL; Salvage_MtnA,Putative
translation,CUFF.59203.1
(1131 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57963 similar to UniRef100_Q5XTZ5 Cluster: Isopenteny... 1417 0.0
gnl|LJGI|TC72286 similar to UniRef100_A7PDU5 Cluster: Chromosome... 971 0.0
gnl|LJGI|FS320665 weakly similar to UniRef100_A7NWV1 Cluster: Ch... 100 4e-20
>gnl|LJGI|TC57963 similar to UniRef100_Q5XTZ5 Cluster: Isopentenyl-diphosphate delta
isomerase 2; n=1; Zea mays|Rep: Isopentenyl-diphosphate
delta isomerase 2 - Zea mays (Maize), partial (60%)
Length = 796
Score = 1417 bits (715), Expect = 0.0
Identities = 715/715 (100%)
Strand = Plus / Plus
Query: 1 atggcatcatcgggttcgaacgaactcaccggcaccaacacgcttcagtccattcgctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atggcatcatcgggttcgaacgaactcaccggcaccaacacgcttcagtccattcgctac 141
Query: 61 aatcgcggttcccttcagcttcttgatcagagaaaactccctctagaaacaatttacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aatcgcggttcccttcagcttcttgatcagagaaaactccctctagaaacaatttacttg 201
Query: 121 gagattcgcgattcaaccgatggctggaatgccattcgggatatggtggtccgaggagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gagattcgcgattcaaccgatggctggaatgccattcgggatatggtggtccgaggagca 261
Query: 181 cctgctattgccattgcagccgcactcgccctggctgtggaggtatctaatctaggtgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cctgctattgccattgcagccgcactcgccctggctgtggaggtatctaatctaggtgat 321
Query: 241 tttagtgggtcgcccagtgatgcggcttccttcctgcagaacaagttagaatatcttgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tttagtgggtcgcccagtgatgcggcttccttcctgcagaacaagttagaatatcttgtc 381
Query: 301 tcaagtcggccaactgcagtgaacctatcagatgctgcaacaaaactcaaagaagtcata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcaagtcggccaactgcagtgaacctatcagatgctgcaacaaaactcaaagaagtcata 441
Query: 361 tctggagctgctgctaccgcttcagaggccaaaagtgtttttcaggattatatagaggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tctggagctgctgctaccgcttcagaggccaaaagtgtttttcaggattatatagaggct 501
Query: 421 gctgaaattatgctcgtcgatgatgttgcctcaaatagagcaattggttcttatggagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gctgaaattatgctcgtcgatgatgttgcctcaaatagagcaattggttcttatggagct 561
Query: 481 acttttattcaacaccaagttgagaagcctaagctttctgttttgacccattgcaacact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 acttttattcaacaccaagttgagaagcctaagctttctgttttgacccattgcaacact 621
Query: 541 ggaagtttagctactgctggatatggtactgctctgggtgtaatccgtgcacttcatagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ggaagtttagctactgctggatatggtactgctctgggtgtaatccgtgcacttcatagt 681
Query: 601 ggaggagctttagaaagggcttattgcacagaaacacgcccattcaatcaaggatctaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ggaggagctttagaaagggcttattgcacagaaacacgcccattcaatcaaggatctaga 741
Query: 661 ctgactgcctttgagttggtacatgataaaataccagcagctcttatagcggatt 715
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ctgactgcctttgagttggtacatgataaaataccagcagctcttatagcggatt 796
>gnl|LJGI|TC72286 similar to UniRef100_A7PDU5 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1411
Score = 971 bits (490), Expect = 0.0
Identities = 490/490 (100%)
Strand = Plus / Plus
Query: 642 attcaatcaaggatctagactgactgcctttgagttggtacatgataaaataccagcagc 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 attcaatcaaggatctagactgactgcctttgagttggtacatgataaaataccagcagc 626
Query: 702 tcttatagcggattctgctgcagctgcactaatgaagtcgggacgcgtggatgctgttgt 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tcttatagcggattctgctgcagctgcactaatgaagtcgggacgcgtggatgctgttgt 686
Query: 762 tgtgggggcggatcgtgttgcatcaaacggagacacagccaacaaaattggaacctacag 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tgtgggggcggatcgtgttgcatcaaacggagacacagccaacaaaattggaacctacag 746
Query: 822 tgttgccttatgtgccaagtttcataatgtacccttttatgtggctgcaccattgacttc 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tgttgccttatgtgccaagtttcataatgtacccttttatgtggctgcaccattgacttc 806
Query: 882 aattgatctctcactttcttctggagaagaaattgtcattgaggagagatctcccaagga 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 aattgatctctcactttcttctggagaagaaattgtcattgaggagagatctcccaagga 866
Query: 942 gttgttgaactcacgtggaggacttggagagcaggttgctgcatcaggaatttctgtatg 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 gttgttgaactcacgtggaggacttggagagcaggttgctgcatcaggaatttctgtatg 926
Query: 1002 gaaccctgcttttgatgtcacacctgctaacataatatctgggattattactgagaaggg 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 gaaccctgcttttgatgtcacacctgctaacataatatctgggattattactgagaaggg 986
Query: 1062 tgtcattacaaagtcatctgctgctgatgcttttgacataaaagctttcatacaaaaaac 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 tgtcattacaaagtcatctgctgctgatgcttttgacataaaagctttcatacaaaaaac 1046
Query: 1122 actttaaggg 1131
||||||||||
Sbjct: 1047 actttaaggg 1056
Score = 952 bits (480), Expect = 0.0
Identities = 489/492 (99%)
Strand = Plus / Plus
Query: 1 atggcatcatcgggttcgaacgaactcaccggcaccaacacgcttcagtccattcgctac 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 81 atggcatcatcgggttcgaacgaactcaccggcaccaacacgctccagtccattcgctac 140
Query: 61 aatcgcggttcccttcagcttcttgatcagagaaaactccctctagaaacaatttacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 aatcgcggttcccttcagcttcttgatcagagaaaactccctctagaaacaatttacttg 200
Query: 121 gagattcgcgattcaaccgatggctggaatgccattcgggatatggtggtccgaggagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagattcgcgattcaaccgatggctggaatgccattcgggatatggtggtccgaggagca 260
Query: 181 cctgctattgccattgcagccgcactcgccctggctgtggaggtatctaatctaggtgat 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgctattgccattgcggccgcactcgccctggctgtggaggtatctaatctaggtgat 320
Query: 241 tttagtgggtcgcccagtgatgcggcttccttcctgcagaacaagttagaatatcttgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttagtgggtcgcccagtgatgcggcttccttcctgcagaacaagttagaatatcttgtc 380
Query: 301 tcaagtcggccaactgcagtgaacctatcagatgctgcaacaaaactcaaagaagtcata 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 tcaagtcggccaactgcagtgaacctatcagatgctgcaacaaaattcaaagaagtcata 440
Query: 361 tctggagctgctgctaccgcttcagaggccaaaagtgtttttcaggattatatagaggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctggagctgctgctaccgcttcagaggccaaaagtgtttttcaggattatatagaggct 500
Query: 421 gctgaaattatgctcgtcgatgatgttgcctcaaatagagcaattggttcttatggagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctgaaattatgctcgtcgatgatgttgcctcaaatagagcaattggttcttatggagct 560
Query: 481 acttttattcaa 492
||||||||||||
Sbjct: 561 acttttattcaa 572
>gnl|LJGI|FS320665 weakly similar to UniRef100_A7NWV1 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 727
Score = 99.6 bits (50), Expect = 4e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 78 gcttcttgatcagagaaaactccctctagaaacaatttacttggagattcgcgattcaac 137
||||||||||||||||||||||||||||||| |||| |||||||| ||||| ||||||||
Sbjct: 129 gcttcttgatcagagaaaactccctctagaagcaatctacttggaaattcgagattcaac 188
Query: 138 cgatggctgg 147
| ||||||||
Sbjct: 189 ccatggctgg 198
Score = 60.0 bits (30), Expect = 3e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 atggcatcatcgggttcgaacgaactcacc 30
||||||||||||||||||||||||||||||
Sbjct: 65 atggcatcatcgggttcgaacgaactcacc 94