Miyakogusa Predicted Gene

Lj6g3v1177290.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1177290.1 Non Chatacterized Hit- tr|F6HUU4|F6HUU4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,27.92,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; PPR_2,Pentatricopeptide repeat; PPR,Penta,CUFF.59200.1
         (893 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS320665 weakly similar to UniRef100_A7NWV1 Cluster: Ch...   888   0.0  

>gnl|LJGI|FS320665 weakly similar to UniRef100_A7NWV1 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (18%)
          Length = 727

 Score =  888 bits (448), Expect = 0.0
 Identities = 448/448 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaagcccagaaccccatatttaaccacccaattctcaaactgttgcaaaaatgccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atgaaagcccagaaccccatatttaaccacccaattctcaaactgttgcaaaaatgccat 339

                                                                       
Query: 61  agcctcaacactcttaagcaagtccatgctcaaatgctaacaactggtcttgcacttcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 agcctcaacactcttaagcaagtccatgctcaaatgctaacaactggtcttgcacttcat 399

                                                                       
Query: 121 acatactgtctcagtcacctccttaccatatcttccaagcttgcctcaacctatgctctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 acatactgtctcagtcacctccttaccatatcttccaagcttgcctcaacctatgctctc 459

                                                                       
Query: 181 accatctttagctctatcccaaaccccacagttttcctctacaacacactcatttcttcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 accatctttagctctatcccaaaccccacagttttcctctacaacacactcatttcttcc 519

                                                                       
Query: 241 tttactagtcatagtagccaaatccatctagcattctcgctttataatcgcattctcgct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tttactagtcatagtagccaaatccatctagcattctcgctttataatcgcattctcgct 579

                                                                       
Query: 301 cacaagaccctccaacccaatagcttcactttcccctcgctcttcaaggcttgttgtggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 cacaagaccctccaacccaatagcttcactttcccctcgctcttcaaggcttgttgtggc 639

                                                                       
Query: 361 tctggccattggtttcaatatggtccgcccctccacgcccatgttttgaagttccttgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tctggccattggtttcaatatggtccgcccctccacgcccatgttttgaagttccttgaa 699

                                       
Query: 421 ccgccgtatgatcactttgttcaagcgt 448
           ||||||||||||||||||||||||||||
Sbjct: 700 ccgccgtatgatcactttgttcaagcgt 727