Miyakogusa Predicted Gene

Lj6g3v1177270.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1177270.1 Non Chatacterized Hit- tr|C5YBE5|C5YBE5_SORBI
Putative uncharacterized protein Sb06g021180
OS=Sorghu,55.38,0.00000000006,INTER-ALPHA-TRYPSIN INHIBITOR HEAVY
CHAIN,NULL; VON WILLEBRAND FACTOR, TYPE A DOMAIN
CONTAINING,NULL,CUFF.59198.1
         (819 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63564 similar to UniRef100_A7PDU4 Cluster: Chromosome...    70   2e-11

>gnl|LJGI|TC63564 similar to UniRef100_A7PDU4 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 725

 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                       
Query: 391 cagggttcaattctaggtgtggaggttagtgttcatagaaaatctttttctactcaactg 450
           ||||||||||||||||||||||| |||| || |||||||||| | |  |||||||| || 
Sbjct: 460 cagggttcaattctaggtgtggaagttactgctcatagaaaaacatactctactcagctt 519

                              
Query: 451 gttgatatggaagacaaca 469
           ||||  |||||||||||||
Sbjct: 520 gttgtaatggaagacaaca 538



 Score = 65.9 bits (33), Expect = 4e-10
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                       
Query: 175 atcgttgacaaccctgatgtccctagctaccagcctcacgtgcatggcaggtgcgacccg 234
           ||||| || ||||||||  |||| |||||||||||||| ||| ||||  |||||||||| 
Sbjct: 247 atcgtggataaccctgacatcccgagctaccagcctcatgtgtatggacggtgcgaccct 306

                                    
Query: 235 cccgcgctcattccccttcacatga 259
           || ||||| ||||||||||| ||||
Sbjct: 307 ccggcgctgattccccttcagatga 331