Miyakogusa Predicted Gene

Lj6g3v1177260.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1177260.1 tr|Q1YZ74|Q1YZ74_PHOPR Inter-alpha-trypsin
inhibitor domain protein OS=Photobacterium profundum
3TCK,33.52,1e-17,no description,NULL; vWA-like,NULL;
INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN,NULL; VON WILLEBRAND
F,CUFF.59197.1
         (552 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79987 weakly similar to UniRef100_Q9LMB7 Cluster: F14...   357   5e-98

>gnl|LJGI|TC79987 weakly similar to UniRef100_Q9LMB7 Cluster: F14D16.26; n=1;
           Arabidopsis thaliana|Rep: F14D16.26 - Arabidopsis
           thaliana (Mouse-ear cress), partial (19%)
          Length = 503

 Score =  357 bits (180), Expect = 5e-98
 Identities = 360/420 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcggggaaagctaattgaagacacaaagaatgcactatcagctgcactctctaagctt 60
           |||| ||||||||||||||| ||||||||||||||||||||  |||| ||||||||||||
Sbjct: 73  atgcagggaaagctaattgatgacacaaagaatgcactatcgtctgccctctctaagctt 132

                                                                       
Query: 61  gaccctgaggattcatttagtattatagcatttaatggagagagatatctattttcaaca 120
            | ||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||| |
Sbjct: 133 aatcctgatgattcatttaatattatagcctttaatggagagagttatctattttcaaaa 192

                                                                       
Query: 121 tcaatggaattggcctcaaaggatgctgttgaaagggctattgagtggattaatataaac 180
           || ||||||  ||| || |  ||||||||||||| ||| | |||||||||  || | |||
Sbjct: 193 tcgatggaaccggcttctagtgatgctgttgaaaaggccactgagtggatggatgtgaac 252

                                                                       
Query: 181 tttgttgcagggggtgatacaaatattttgcaacccttaaacaaggcaatggaaatgcta 240
           |||||    ||||||| ||||||||||||||  |||||||||| |||||| || ||||||
Sbjct: 253 tttgtcattgggggtggtacaaatattttgcgtcccttaaacacggcaatagagatgcta 312

                                                                       
Query: 241 tctgatgctcgaagttcagctccaattattttcctagttacagatggaagtgttgaaaat 300
           || | ||||| |||||||| |||||| |||||||||||||||||||||| ||||||| ||
Sbjct: 313 tccggtgctcaaagttcagttccaataattttcctagttacagatggaactgttgaagat 372

                                                                       
Query: 301 gagagacaaatttgtgatatggtaaagaaccacatgatcaatggcaagtcaacagcccct 360
           ||||| |||||||||||| |||||||||| || |||| ||||||  |||||| |  ||| 
Sbjct: 373 gagaggcaaatttgtgatttggtaaagaatcatatgaccaatggagagtcaatatgcccc 432

                                                                       
Query: 361 cgaatttacactcttggcataggttcattttgcaatcactacttcttgcggatgcttgct 420
           ||| |||||||| |||||||||| ||||| ||||||||||| |||||||| |||||||||
Sbjct: 433 cgagtttacacttttggcataggctcattctgcaatcactatttcttgcgaatgcttgct 492