Miyakogusa Predicted Gene
- Lj6g3v1176160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1176160.1 Non Chatacterized Hit- tr|C0PFI1|C0PFI1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,33.06,2e-18,CCT_2,CO/COL/TOC1, conserved site; tify,Tify;
seg,NULL; TIFY,Tify; no description,Tify,CUFF.59190.1
(774 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70259 similar to UniRef100_A7P6F8 Cluster: Chromosome... 1534 0.0
gnl|LJGI|TC80215 168 3e-41
gnl|LJGI|TC64863 similar to UniRef100_A7P6F8 Cluster: Chromosome... 82 6e-15
gnl|LJGI|TC58064 similar to UniRef100_Q9LMA8 Cluster: Protein TI... 74 1e-12
gnl|LJGI|GO036339 weakly similar to UniRef100_A7PDT3 Cluster: Ch... 66 3e-10
>gnl|LJGI|TC70259 similar to UniRef100_A7P6F8 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 1258
Score = 1534 bits (774), Expect = 0.0
Identities = 774/774 (100%)
Strand = Plus / Plus
Query: 1 atgtctagctcatcggaattctctgaattttccggcaacaaggcggcggcgaagtcgccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atgtctagctcatcggaattctctgaattttccggcaacaaggcggcggcgaagtcgccg 140
Query: 61 gagaagaccactttctctcagacttgtagtctcttgagtcaatacatcaaggagaaaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gagaagaccactttctctcagacttgtagtctcttgagtcaatacatcaaggagaaaggt 200
Query: 121 agcttcggagatcttactcttggcatgacatgcaacaacaccgaacaaactggggcacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcttcggagatcttactcttggcatgacatgcaacaacaccgaacaaactggggcacct 260
Query: 181 gagacttcttgtcagtctgcaacaaccatgaacttgtttcctgccaaggaaagcaacatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagacttcttgtcagtctgcaacaaccatgaacttgtttcctgccaaggaaagcaacatg 320
Query: 241 acaccaaagaatctgactcctatgaatttgctctctccacaagagattccaaccttgatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaccaaagaatctgactcctatgaatttgctctctccacaagagattccaaccttgatc 380
Query: 301 aataattctagtgcaattaagtctgtgagcaaaggggctaaagcttcacagttgacaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataattctagtgcaattaagtctgtgagcaaaggggctaaagcttcacagttgacaatc 440
Query: 361 ttttatgctggccaagtaattgtgcttgatgacttccctgctgataaagcgagtgaactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttatgctggccaagtaattgtgcttgatgacttccctgctgataaagcgagtgaactc 500
Query: 421 atgtccttggcaaccaaaagcacctcccaaagccagaacaactctgttcaagagaaccag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtccttggcaaccaaaagcacctcccaaagccagaacaactctgttcaagagaaccag 560
Query: 481 ccttcatttgctcctagtctgatcagaacatctgctgattcaagtgctccggttattcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttcatttgctcctagtctgatcagaacatctgctgattcaagtgctccggttattcct 620
Query: 541 ggtgtgaatatcatcccttgtaccggcaccaactctattcccgaacacgctcaggtgtca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtgtgaatatcatcccttgtaccggcaccaactctattcccgaacacgctcaggtgtca 680
Query: 601 tcgagacctattgtttgcgatctgccaattgctaggaaagcttcacttcatcggttcctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcgagacctattgtttgcgatctgccaattgctaggaaagcttcacttcatcggttcctg 740
Query: 661 gagaagagaaaggatagaattgctgccaaagcaccatatgaagtgacaaatctgatgggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gagaagagaaaggatagaattgctgccaaagcaccatatgaagtgacaaatctgatgggg 800
Query: 721 catgctaataagccagctgagtccatgtcatggcttgggtttggtaccagatga 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 catgctaataagccagctgagtccatgtcatggcttgggtttggtaccagatga 854
>gnl|LJGI|TC80215
Length = 427
Score = 168 bits (85), Expect = 3e-41
Identities = 91/93 (97%)
Strand = Plus / Plus
Query: 676 agaattgctgccaaagcaccatatgaagtgacaaatctgatggggcatgctaataagcca 735
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 agaattgctgcccaagcaccatatgaagtgacaaatctgatggggcatgctaataagcca 94
Query: 736 gctgagtccatgtcatggcttgggtttggtacc 768
|||||||||||||| ||||||||||||||||||
Sbjct: 95 gctgagtccatgtcctggcttgggtttggtacc 127
>gnl|LJGI|TC64863 similar to UniRef100_A7P6F8 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 718
Score = 81.8 bits (41), Expect = 6e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 619 gatctgccaattgctaggaaagcttcacttcatcggttcctggagaagagaaaggataga 678
||||| |||||||||||||||| ||| || || || |||||||||||||| |||||||||
Sbjct: 595 gatctaccaattgctaggaaagtttccctccaccgtttcctggagaagaggaaggataga 654
Query: 679 attgctgccaaagcaccatat 699
|| || ||||||||||||||
Sbjct: 655 atctcttccaaagcaccatat 675
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 338 ctaaagcttcacagttgacaatcttttatgctggccaagtaattgtgcttgatgacttcc 397
|||||||| ||||||||||||| ||||||| || ||||| |||||| ||||||| || |
Sbjct: 413 ctaaagctgcacagttgacaatgttttatgaggggcaagttattgtgtttgatgattttc 472
Query: 398 ctgctgataaag 409
||||||| ||||
Sbjct: 473 ctgctgagaaag 484
>gnl|LJGI|TC58064 similar to UniRef100_Q9LMA8 Cluster: Protein TIFY 10A; n=2;
Arabidopsis thaliana|Rep: Protein TIFY 10A - Arabidopsis
thaliana (Mouse-ear cress), partial (25%)
Length = 891
Score = 73.8 bits (37), Expect = 1e-12
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 606 acctattgtttgcgatctgccaattgctaggaaagcttcacttcatcggttcctggagaa 665
|||||||||| ||||| ||||| ||||||||||||||||| | || ||| |||||||
Sbjct: 502 acctattgttgttgatcttccaatgactaggaaagcttcactttaccgattcttggagaa 561
Query: 666 gagaaaggatagaattgctgccaaagcaccata 698
|| || |||||||||||||||| |||||||||
Sbjct: 562 aaggaaagatagaattgctgccagagcaccata 594
>gnl|LJGI|GO036339 weakly similar to UniRef100_A7PDT3 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 736
Score = 65.9 bits (33), Expect = 3e-10
Identities = 76/89 (85%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 606 acctattgtttgcgatctgccaattgctaggaaagcttcacttcatcggttcctggagaa 665
|||||||||| ||||| ||||| ||||||||||||||||| | || ||| |||||||
Sbjct: 610 acctattgttgttgatcttccaatgactaggaaagcttcactttaccgattcttggagaa 669
Query: 666 gagaaaggatagaattgctgccaaagcac 694
||||| |||||||||||||||| |||||
Sbjct: 670 aagaaa-gatagaattgctgccagagcac 697