Miyakogusa Predicted Gene
- Lj6g3v1174050.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1174050.2 Non Chatacterized Hit- tr|I1L1T2|I1L1T2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max GN=G,81.5,0,CAD &
PB1 domains,NULL; FAMILY NOT NAMED,NULL; seg,NULL; Auxin_resp,Auxin
response factor; AUX_IAA,A,CUFF.59188.2
(2610 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO032004 similar to UniRef100_A7PDS6 Cluster: Chromosom... 242 9e-63
gnl|LJGI|TC75228 similar to UniRef100_A7PDS6 Cluster: Chromosome... 123 6e-27
gnl|LJGI|BP055405 weakly similar to UniRef100_Q8RYC8 Cluster: Au... 111 2e-23
gnl|LJGI|BP042557 homologue to UniRef100_A7PJQ8 Cluster: Chromos... 88 3e-16
gnl|LJGI|TC81270 similar to UniRef100_A7NSY4 Cluster: Chromosome... 60 7e-08
gnl|LJGI|TC60159 similar to UniRef100_Q8RYC8 Cluster: Auxin resp... 60 7e-08
>gnl|LJGI|GO032004 similar to UniRef100_A7PDS6 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 499
Score = 242 bits (122), Expect = 9e-63
Identities = 405/498 (81%), Gaps = 6/498 (1%)
Strand = Plus / Plus
Query: 1607 ctactctttcagatggagatgcaccatcatgctcaacttctccatctactaatacctgtc 1666
|||| ||| ||||||||||||| |||||||||||||| |||||||||||||||| ||| |
Sbjct: 2 ctacacttacagatggagatgccccatcatgctcaacctctccatctactaataactgcc 61
Query: 1667 agatatctcctccaaatcttctgagaagaaatcaacaaataactgtcacattaggggtga 1726
|||||||||| ||||||| |||| ||||||||||||| || ||| |||||||||| |
Sbjct: 62 agatatctccatcaaatctcctgaaaagaaatcaacaagtacctgctacattagggggta 121
Query: 1727 cttcagttgttgaacccaccaataatctgat---ggagctgcagactaagtctgacatgc 1783
|| || || || |||| | ||||||||| |||||| |||| ||||||||||||||
Sbjct: 122 gtttggtagtggagtccactagtaatctgatacaggagcttcagagtaagtctgacatgc 181
Query: 1784 agatcaaacatgaactgcacagtgctaaagggcctgacaagctaaaatataaaggaacaa 1843
|||| ||| |||| | | || |||||| |||| |||| || |||||||| ||||
Sbjct: 182 agataaaaaatgagttctcaaatgtgaaagggtttgaccagcttaagtataaagggacaa 241
Query: 1844 ttgctgaacagatgga---gacttcttccggaacatcttactgtattgatactggtaata 1900
| |||| |||||||| ||||||| | ||||||||||||| ||||| ||||||||
Sbjct: 242 tcactgatcagatggaagcttcttcttctgaaacatcttactgtcttgatcctggtaatg 301
Query: 1901 tccaccagaacttccaacttcccaacttctgcatggatggggatgtccaatcacacccaa 1960
|||| |||| ||| | |||| ||||||| || ||||| |||||||||||||||||| | |
Sbjct: 302 tccagcagagcttaccactttccaacttttgtatggaaggggatgtccaatcacactcta 361
Query: 1961 gaaataatctaccatttgcatctcatcttgatggattaacaccagatacttttctctcaa 2020
||| ||||||||||||| ||| |||||||||| |||| || ||| || | || |
Sbjct: 362 gaagcaatctaccatttgactctaatcttgatggtctaacgcctgatcctgtgcttatga 421
Query: 2021 gggggtatgactctcaaaaagatcttcagaacttgctgtctaattatggtgctgctccaa 2080
|||||||||||||||| ||||||||||| ||| || ||||||||||||||| ||| || |
Sbjct: 422 gggggtatgactctcagaaagatcttcaaaacatgttgtctaattatggtggtgccccga 481
Query: 2081 gagacattgaaactgagc 2098
||||||||||||||||||
Sbjct: 482 gagacattgaaactgagc 499
>gnl|LJGI|TC75228 similar to UniRef100_A7PDS6 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 698
Score = 123 bits (62), Expect = 6e-27
Identities = 110/126 (87%)
Strand = Plus / Plus
Query: 2474 tactgtcatctgctgaggtgcagcaaatgagcttggatggggatttaggccatgttccaa 2533
||||||||| | |||||||||||||||||||||||||||| |||||||| | |||||||
Sbjct: 1 tactgtcatatactgaggtgcagcaaatgagcttggatggagatttaggtaacgttccaa 60
Query: 2534 tccccaatcaggcttgtagcgagacggaaaatggcaatgcttggaggggacagtatgatg 2593
|||||||||| ||||| || | || || | ||||||||| |||||||||| ||||||||
Sbjct: 61 tccccaatcaagcttgcagtggcacagacagtggcaatgcatggaggggaccgtatgatg 120
Query: 2594 ataact 2599
||||||
Sbjct: 121 ataact 126
>gnl|LJGI|BP055405 weakly similar to UniRef100_Q8RYC8 Cluster: Auxin response factor
19; n=2; Arabidopsis thaliana|Rep: Auxin response factor
19 - Arabidopsis thaliana (Mouse-ear cress), partial
(7%)
Length = 512
Score = 111 bits (56), Expect = 2e-23
Identities = 151/183 (82%), Gaps = 2/183 (1%)
Strand = Plus / Minus
Query: 282 ggatgaatcaacagctggtgagcgcccaagcagagtttctatttgggatattgaaccagt 341
||||||||||||| ||||||||| || |||||||||||| |||||| | |||||||| ||
Sbjct: 406 ggatgaatcaacaactggtgagcaccnaagcagagtttcaatttggtaaattgaaccggt 347
Query: 342 tgtgactcctttctacatttgtccacctccnnnnnnnaggcccaagtactcca-agcaac 400
|||||||||||||| || |||||||| |||||||||| |||| || ||
Sbjct: 346 agtgactcctttctatggttatccacctctatttttaaggcccaagt-ttccatggcnac 288
Query: 401 caggaatgccagaagatgagtctgatatagaaaatgcttgcaagagggctatgccttggc 460
||||||||||||| ||||||| |||| |||||||||||| |||||| ||| |||| ||||
Sbjct: 287 caggaatgccagatgatgagtatgatttagaaaatgctttcaagagagctgtgccatggc 228
Query: 461 ttg 463
|||
Sbjct: 227 ttg 225
>gnl|LJGI|BP042557 homologue to UniRef100_A7PJQ8 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 545
Score = 87.7 bits (44), Expect = 3e-16
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 1 atgcatattggcattcttgctgctgcagctcatgctgcttcaaataacagcccttttact 60
||||| |||||| |||||||||||||||||||||| ||||| | || || | |||||
Sbjct: 419 atgcacattggccttcttgctgctgcagctcatgcagcttccacaaatagtcgctttacc 478
Query: 61 atattttataatccaaggaccagcccctctgaatttgtaattccattggccaagta 116
||||| |||||||| ||| | ||||| ||||||||||||||||| |||||| ||||
Sbjct: 479 atattctataatcctagggcaagcccatctgaatttgtaattcctttggcccagta 534
>gnl|LJGI|TC81270 similar to UniRef100_A7NSY4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 786
Score = 60.0 bits (30), Expect = 7e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 2380 tggaaactggtatatgtagatcatgaaaacgacattcttcttgtcggtgatgacccttgg 2439
|||||| |||| ||||||||| |||| | || |||| ||||| |||||||| ||||||
Sbjct: 154 tggaaattggtgtatgtagattatgagagtgatgttctacttgtaggtgatgatccttgg 213
Query: 2440 gaagaatttgtgagctgtgtcc 2461
|||||||||||| | |||||||
Sbjct: 214 gaagaatttgtggggtgtgtcc 235
>gnl|LJGI|TC60159 similar to UniRef100_Q8RYC8 Cluster: Auxin response factor 19; n=2;
Arabidopsis thaliana|Rep: Auxin response factor 19 -
Arabidopsis thaliana (Mouse-ear cress), partial (3%)
Length = 1684
Score = 60.0 bits (30), Expect = 7e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 307 ccaagcagagtttctatttgggatattgaaccagttgtgactcctttcta 356
|||||||||||||| |||||| | ||||||||||| ||||||| ||||||
Sbjct: 1027 ccaagcagagtttcaatttggtaaattgaaccagtagtgactcatttcta 1076
Score = 56.0 bits (28), Expect = 1e-06
Identities = 67/78 (85%), Gaps = 4/78 (5%)
Strand = Plus / Plus
Query: 279 atgggatgaatcaacagctggtgagcgcccaagcagagtttctatttgggatattgaacc 338
|||||||| ||||||| ||||||||| || |||||||||||| ||||| ||||||||
Sbjct: 887 atgggatggatcaacaactggtgagcacc-aagcagagtttcaatttga---attgaacc 942
Query: 339 agttgtgactcctttcta 356
||| ||||||| ||||||
Sbjct: 943 agtagtgactcatttcta 960